RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 C10orf111Q8N326 155 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 Q8N402 240 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 FADS6Q8N9I5 356 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR10Z1Q8NGY1 313 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 DYNC2LI1Q8TCX1 351 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 JAKMIP1Q96N16 626 aaKnown RBP-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 TRNT1Q96Q11 434 aaKnown RBP-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 ATP5SQ99766 215 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 CALN1Q9BXU9 219 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 NKX6-2Q9C056 277 aaPredicted RBP-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 LINC00472Q9H8W2 130 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 DIABLOQ9NR28 239 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 POLR3HQ9Y535 204 aaPredicted RBP-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 TIMM22Q9Y584 194 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 PEX16Q9Y5Y5 336 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 TLN1Q9Y490 2541 aaKnown RBP-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 AKNAQ7Z591 1439 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 PDE4DIPQ5VU43 2346 aa-3.11□□□□□ -2.91
SNORA40.16-201ENST00000517238 SPENQ96T58 3664 aaKnown RBP-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 FXYD6-FXYD2A0A087WZ82 144 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 IGHV2-26A0A0B4J1V2 119 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 A0A1W2PRS3 328 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 A0A1W2PRV1 198 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 H3BP45 60 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 PROSCO94903 275 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 TTC4O95801 387 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 TMEM50AO95807 157 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 SPRR1BP22528 89 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR1E1P30953 314 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 RAB38P57729 211 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 RAB2AP61019 212 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 PDZK1Q5T2W1 519 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 RIPPLY2Q5TAB7 128 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 THOC7Q6I9Y2 204 aaKnown RBP-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 PYHIN1Q6K0P9 492 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 CMC1Q7Z7K0 106 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 SETD3Q86TU7 594 aaPredicted RBP-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 GATD1Q8NB37 220 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR51H1Q8NH63 302 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 CASTOR1Q8WTX7 329 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 CTNNBL1Q8WYA6 563 aaPredicted RBP-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR2M4Q96R27 311 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 PARD6BQ9BYG5 372 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 ULBP3Q9BZM4 244 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR8D2Q9GZM6 311 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 ATXN10Q9UBB4 475 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR52A1Q9UKL2 312 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 CHMP2BQ9UQN3 213 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 DMXL2Q8TDJ6 3036 aa-3.12□□□□□ -2.91
SNORA40.16-201ENST00000517238 MYO5BQ9ULV0 1848 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 A4D1N5 150 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 NCF1BA6NI72 391 aaPredicted RBP-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 MPC1LP0DKB6 136 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 M6PRP20645 277 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 EVI2AP22794 236 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 CA8P35219 290 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 EIF2B2P49770 351 aaKnown RBP-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 SLC35A1P78382 337 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 RPA4Q13156 261 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 CDNFQ49AH0 187 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 CFAP58Q5T655 872 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 PLEKHG7Q6ZR37 379 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 PACRGLQ8N7B6 248 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 OR10J5Q8NHC4 309 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 SFRP2Q96HF1 295 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 FMC1Q96HJ9 113 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 SLC29A1Q99808 456 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 CRACR2AQ9BSW2 395 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 SLC5A7Q9GZV3 580 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 MAT2BQ9NZL9 334 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 DNAJB9Q9UBS3 223 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 MYLKQ15746 1914 aa-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 TNS1Q9HBL0 1735 aaKnown RBP-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 DHX29Q7Z478 1369 aaKnown RBP-3.13□□□□□ -2.91
SNORA40.16-201ENST00000517238 HELZP42694 1942 aaKnown RBP-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 LRBAP50851 2863 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 TRGV1A0A0A0MS02 117 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 HMGB1P1B2RPK0 211 aaPredicted RBP-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 TMEM250H0YL14 139 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 CHADO15335 359 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 GMDSO60547 372 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 SULT1C4O75897 302 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 SCGNO76038 276 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 SPINK8P0C7L1 97 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 COX7CP15954 63 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 HSPA13P48723 471 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 C21orf59P57076 290 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 RCN2Q14257 317 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 TRAM2Q15035 370 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 KRTAP19-6Q3LI70 58 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 Q5XG85 94 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 FAM19A3Q7Z5A8 133 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 VTCN1Q7Z7D3 282 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 UBE2DNLQ8IWF7 75 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 ZBTB8OSQ8IWT0 167 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 DDI1Q8WTU0 396 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 Q8WTZ3 238 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 C11orf40Q8WZ69 217 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 CCL17Q92583 94 aa-3.14□□□□□ -2.91
SNORA40.16-201ENST00000517238 RAB1CQ92928 201 aa-3.14□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms