RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 WDR54Q9H977 334 aa-2.83□□□□□ -2.86
SNORA40.13-201ENST00000516379 MS4A12Q9NXJ0 267 aa-2.83□□□□□ -2.86
SNORA40.13-201ENST00000516379 PIK3R4Q99570 1358 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 IGHV1-58A0A0C4DH39 117 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 OR6C6A6NF89 314 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 C8orf87E5RJ46 101 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 RFXANKO14593 260 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 CCL16O15467 120 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 LYZL6O75951 148 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 OR2F2O95006 317 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 ORM2P19652 201 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 MSNP26038 577 aaKnown RBP-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 FKBP2P26885 142 aaKnown RBP-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 CD86P42081 329 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 ACTBP60709 375 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 UBE2HP62256 183 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 ACTG1P63261 375 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 RHOGP84095 191 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 BAP18Q8IXM2 172 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 PACRGLQ8N7B6 248 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 CCDC112Q8NEF3 446 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 WFDC5Q8TCV5 224 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 TMEM239Q8WW34 195 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 SLC38A4Q969I6 547 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 Q96NJ1 140 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 NMNAT3Q96T66 252 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 DIABLOQ9NR28 239 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 UNC13BO14795 1591 aa-2.84□□□□□ -2.86
SNORA40.13-201ENST00000516379 PSMD11O00231 422 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 TNRC18O15417 2968 aaPredicted RBP-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 KLK1P06870 262 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 MIFP14174 115 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 IFNAR2P48551 515 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 ATP6V0D1P61421 351 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 DEFB109BQ30KR1 87 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 AAED1Q7RTV5 226 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 PLCZ1Q86YW0 608 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 C4orf3Q8WVX3 66 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 ABHD14BQ96IU4 210 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 APOL4Q9BPW4 351 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 ANP32EQ9BTT0 268 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 LYARQ9NX58 379 aaKnown RBP-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 NUP160Q12769 1436 aa-2.85□□□□□ -2.87
SNORA40.13-201ENST00000516379 TRAV12-1A0A0B4J245 112 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 GPR31O00270 319 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 ERLIN1O75477 346 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 STK16O75716 305 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 SSR2P43308 183 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 PSMB3P49720 205 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 HBG1P69891 147 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 HBG2P69892 147 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 SPAG11BQ08648 103 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 ATAD3BQ5T9A4 648 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 Q6ZQY7 126 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 CRLF3Q8IUI8 442 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 TMEM75Q8N9X5 138 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 OR51Q1Q8NH59 317 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 OR8D1Q8WZ84 308 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 CCL19Q99731 98 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 PSTPIP2Q9H939 334 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 ANKRA2Q9H9E1 313 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 MAT2BQ9NZL9 334 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 RNF11Q9Y3C5 154 aa-2.86□□□□□ -2.87
SNORA40.13-201ENST00000516379 NIPBLQ6KC79 2804 aaeCLIP-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 PRRC2CQ9Y520 2896 aaKnown RBP-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 EPPINO95925 133 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 CTSDP07339 412 aaPredicted RBP-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 SLC2A3P11169 496 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 C1QTNF8P60827 252 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 YWHAEP62258 255 aaKnown RBP-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 FAM162BQ5T6X4 162 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 FAHD1Q6P587 224 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 LCN15Q6UWW0 184 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 OR11L1Q8NGX0 322 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 CLHC1Q8NHS4 586 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 DTD1Q8TEA8 209 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 ZMYND19Q96E35 227 aaPredicted RBP-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 OR7D2Q96RA2 312 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 C20orf24Q9BUV8 137 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 MED28Q9H204 178 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 OR51B6Q9H340 312 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 FBXL15Q9H469 300 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 HSPB8Q9UJY1 196 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 TIMM22Q9Y584 194 aa-2.87□□□□□ -2.87
SNORA40.13-201ENST00000516379 VPS13DQ5THJ4 4388 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 CHD2O14647 1828 aaKnown RBP-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 I3L4J1 428 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 TRAPPC6AO75865 159 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 STOMP27105 288 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 TSPAN5P62079 268 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 RCN1Q15293 331 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 FAM122BQ7Z309 247 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 ERP44Q9BS26 406 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 NUP58Q9BVL2 599 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 LPAR5Q9H1C0 372 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 MIXL1Q9H2W2 232 aa-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 MRPL27Q9P0M9 148 aaKnown RBP-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 RBMX2Q9Y388 322 aaKnown RBP-2.88□□□□□ -2.87
SNORA40.13-201ENST00000516379 ABCA1O95477 2261 aa-2.89□□□□□ -2.87
SNORA40.13-201ENST00000516379 ACOX3O15254 700 aa-2.89□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms