RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 OR4A16Q8NH70 328 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OSR1Q8TAX0 266 aaPredicted RBP6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LHX4Q969G2 390 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RPEQ96AT9 228 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RHOVQ96L33 236 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PSMG3-AS1Q96PY0 264 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ZNF471Q9BX82 626 aaPredicted RBP6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SIRPDQ9H106 197 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 C11orf1Q9H5F2 150 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UNKLQ9H9P5 680 aaKnown RBP6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MMP26Q9NRE1 261 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM140Q9NV12 185 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 BEX4Q9NWD9 120 aaPredicted RBP6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 WASHC3Q9Y3C0 194 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ABCA2Q9BZC7 2435 aa6.2□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CELSR2Q9HCU4 2923 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ODF3BA8MYP8 253 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FAM157AC9JC47 383 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TAAR5O14804 337 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IFNA7P01567 189 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IGKV1-16P04430 117 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR9G9P0C7N8 305 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CAV2P51636 162 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UBE2KP61086 200 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UBA52P62987 128 aaKnown RBP6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 KLRD1Q13241 179 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 DEFB113Q30KQ7 82 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM177Q53S58 311 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TPTE2P1Q5T6R2 138 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR4A47Q6IF82 309 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HCP5Q6MZN7 132 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TEX261Q6UWH6 196 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MOB3BQ86TA1 216 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 VKORC1L1Q8N0U8 176 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LRRC75A-AS1Q8N1F1 130 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ZNF680Q8NEM1 530 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR4C13Q8NGP0 309 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FLYWCH2Q96CP2 140 aaKnown RBP6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HARBI1Q96MB7 349 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MS4A7Q9GZW8 240 aaPredicted RBP6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SLC25A31Q9H0C2 315 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RBKSQ9H477 322 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LPAR2Q9HBW0 351 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LYRM2Q9NU23 88 aaPredicted RBP6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 DPM3Q9P2X0 92 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HSPB7Q9UBY9 170 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PAIP2BQ9ULR5 123 aaKnown RBP6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 INSIG2Q9Y5U4 225 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 WSB1Q9Y6I7 421 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 U3KQ87 197 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HELZ2Q9BYK8 2649 aaKnown RBP6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FBN2P35556 2912 aa6.19□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MED13LQ71F56 2210 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IGSF23A1L1A6 192 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FAM24AA6NFZ4 105 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 C15orf61A6NNL5 157 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CEBPZOSA8MTT3 80 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RNASEK-C17orf49H0YIS7 233 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LY6LH3BQJ8 138 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SPDEFO95238 335 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IFNA17P01571 189 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IAPPP10997 89 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HOXB4P17483 251 aaPredicted RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 USF1P22415 310 aaPredicted RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PAX9P55771 341 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LGALS4P56470 323 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TAS2R30P59541 319 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR2B8PP59922 312 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RPS16P62249 146 aaKnown RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 EIF5AP63241 154 aaKnown RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RELBQ01201 579 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 EWSR1Q01844 656 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 AARDQ4LEZ3 155 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MINOS1Q5TGZ0 78 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ZNF429Q86V71 674 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 STX12Q86Y82 276 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR8H3Q8N146 312 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM252Q8N6L7 170 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 VSTM2AQ8TAG5 236 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ST8SIA2Q92186 375 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SMIM8Q96KF7 97 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CIB3Q96Q77 187 aaPredicted RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CLCC1Q96S66 551 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TBX15Q96SF7 602 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 QTRT1Q9BXR0 403 aaKnown RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SMIM3Q9BZL3 60 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 BET1LQ9NYM9 111 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PSENENQ9NZ42 101 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FBXL17Q9UF56 701 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 NUP50Q9UKX7 468 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MINOS1-NBL1R4GNA1 71 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PTPN13Q12923 2485 aa6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IGHV3-72A0A0B4J1Y9 119 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TRAV3A0A0B4J244 114 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 A0A1W2PPI3 338 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 A0A1W2PRD5 423 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms