RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 KLK12Q9UKR0 248 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 C14orf166Q9Y224 244 aaKnown RBP1.95□□□□□ -2.1
HERC4-215ENST00000515753 BTRCQ9Y297 605 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 DMDP11532 3685 aa1.95□□□□□ -2.1
HERC4-215ENST00000515753 KIF26AQ9ULI4 1882 aaPredicted RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 URB1O60287 2271 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 PKD1L2Q7Z442 2459 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 TRAV17A0A0B4J275 112 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 IGHV1-3A0A0C4DH29 117 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 GMNCA6NCL1 334 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 C2orf74A8MZ97 194 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 ZNF207O43670 478 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 POP7O75817 140 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 ARL6IP5O75915 188 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 VAMP5O95183 116 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SOD1P00441 154 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 IFNA16P05015 189 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 HIST1H1EP10412 219 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 COX6B1P14854 86 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 RPL12P30050 165 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 MIPP30301 263 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SLC6A1P30531 599 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 DAD1P61803 113 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 ARF6P62330 175 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 DCDP81605 110 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 FMODQ06828 376 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 TSPAN31Q12999 210 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SKP2Q13309 424 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 C1DQ13901 141 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 EBPQ15125 230 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 HIST3H3Q16695 136 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 DEFB116Q30KQ4 102 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 CENPWQ5EE01 88 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 CLVS2Q5SYC1 327 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 ZNF684Q5T5D7 378 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SAXO2Q658L1 398 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SCGB1D4Q6XE38 83 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 CYHR1Q6ZMK1 362 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 TRAPPC5Q8IUR0 188 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SLC35G3Q8N808 338 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 FDCSPQ8NFU4 85 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 GPR32P1Q8NGA4 272 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 OR52N1Q8NH53 320 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 OR10D3Q8NH80 312 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 JOSD2Q8TAC2 188 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 LINC01560Q8TB33 94 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 CT55Q8WUE5 264 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 PATE1Q8WXA2 126 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SLC25A46Q96AG3 418 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 TLCD1Q96CP7 247 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 DCUN1D1Q96GG9 259 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 THTPAQ9BU02 230 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SNRNP25Q9BV90 132 aaKnown RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 ZNF717Q9BY31 904 aaPredicted RBP1.94□□□□□ -2.1
HERC4-215ENST00000515753 MROQ9BYG7 248 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 BCL2L14Q9BZR8 327 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SND1-IT1Q9HBX3 110 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 ASF1BQ9NVP2 202 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 POMPQ9Y244 141 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 POLR1DQ9Y2S0 133 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 ZNF292O60281 2723 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 SPTBN4Q9H254 2564 aa1.94□□□□□ -2.1
HERC4-215ENST00000515753 IGLV4-69A0A075B6H9 119 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 IGKV1-6A0A0C4DH72 117 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 K7EPK0 472 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 TXNDC9O14530 226 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 COPEO14579 308 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 RGS5O15539 181 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 RBFOX2O43251 390 aaKnown RBP eCLIP1.93□□□□□ -2.1
HERC4-215ENST00000515753 FOXH1O75593 365 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 OR2B3O76000 313 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 KRT75O95678 551 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 IGKV1-39P01597 117 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 HLA-DQB1P01920 261 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 IGKV1D-39P04432 117 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 TCRBP04435 133 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 UQCRHP07919 91 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 IL3P08700 152 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 GADD45AP24522 165 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 HSD11B1P28845 292 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 DDTP30046 118 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 EVI2BP34910 448 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 INPP1P49441 399 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 ZNF83P51522 516 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 MP68P56378 58 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 MAXP61244 160 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 ERVS71-1P61550 626 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 LSM6P62312 80 aaKnown RBP1.93□□□□□ -2.1
HERC4-215ENST00000515753 MYL5Q02045 173 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 BTN1A1Q13410 526 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 PPP1R1AQ13522 171 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 IHHQ14623 411 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 TMED2Q15363 201 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 FAM222AQ5U5X8 452 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 Q5W150 140 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 FAM104BQ5XKR9 115 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 ZFP1Q6P2D0 407 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 Q6ZR03 302 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 VN1R4Q7Z5H5 301 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms