RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 CREBL2O60519 120 aaPredicted RBP9.41□□□□□ -0.9
SNF8-215ENST00000515572 RAMP3O60896 148 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 HPRT1P00492 218 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 IGF1P05019 195 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 CRYGBP07316 175 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
SNF8-215ENST00000515572 VSIG10L2P0DP72 767 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 IL7P13232 177 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 CD40LGP29965 261 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 PIGPP57054 158 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 BRWD1-AS2P59051 145 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 TAS2R31P59538 309 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 TMEM95Q3KNT9 176 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 ZNF562Q6V9R5 426 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 TBC1D26Q86UD7 250 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 MRGPRFQ96AM1 343 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 CCDC32Q9BV29 185 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 PLEKHA2Q9HB19 425 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 COMMD9Q9P000 198 aa9.41□□□□□ -0.9
SNF8-215ENST00000515572 C14orf166Q9Y224 244 aaKnown RBP9.41□□□□□ -0.9
SNF8-215ENST00000515572 IGHV7-81A0A0B4J1V7 117 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 SRRM4A7MD48 611 aaKnown RBP9.4□□□□□ -0.9
SNF8-215ENST00000515572 CENPXA8MT69 81 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 MPPED1O15442 326 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 B3GALNT1O75752 331 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 NQO2P16083 231 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 PI3P19957 117 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 SLC35B1P78383 322 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 CENPVQ7Z7K6 275 aaPredicted RBP9.4□□□□□ -0.9
SNF8-215ENST00000515572 RHOVQ96L33 236 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 SLC25A21Q9BQT8 299 aaPredicted RBP9.4□□□□□ -0.9
SNF8-215ENST00000515572 C7orf50Q9BRJ6 194 aaKnown RBP9.4□□□□□ -0.9
SNF8-215ENST00000515572 OR51J1Q9H342 316 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 COPZ2Q9P299 210 aa9.4□□□□□ -0.9
SNF8-215ENST00000515572 TENM1Q9UKZ4 2725 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 LINC01548A6NM66 108 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 H0Y980 276 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 OR2A4O95047 310 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 CA2P00918 260 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
SNF8-215ENST00000515572 VDAC1P21796 283 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 ERVK-16P61578 105 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 CX3CL1P78423 397 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 ZNF846Q147U1 533 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 POU2AF1Q16633 256 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 STPG2Q8N412 459 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
SNF8-215ENST00000515572 OR2A7Q96R45 310 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 CLCC1Q96S66 551 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 CITED1Q99966 193 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
SNF8-215ENST00000515572 STAB1Q9NY15 2570 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 C3orf85A0A1B0GTC6 90 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 FCN1O00602 326 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 ATP6V0E1O15342 81 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 FBXO24O75426 580 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 ACTL6BO94805 426 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 KBTBD11O94819 623 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 S1PR2O95136 353 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 SERPINE2P07093 398 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 FGF2P09038 288 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 RPA2P15927 270 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 LPAR6P43657 344 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
SNF8-215ENST00000515572 PRSS8Q16651 343 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 ZNF585BQ52M93 769 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 OR4A47Q6IF82 309 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 VKORC1L1Q8N0U8 176 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 PUSL1Q8N0Z8 303 aaKnown RBP9.38□□□□□ -0.91
SNF8-215ENST00000515572 CADM3Q8N126 398 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 OR5AU1Q8NGC0 362 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 TMEM167AQ8TBQ9 72 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 ARPC1AQ92747 370 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 NOL4LQ96MY1 436 aaPredicted RBP9.38□□□□□ -0.91
SNF8-215ENST00000515572 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
SNF8-215ENST00000515572 C5orf66Q9H5L9 145 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 PARP11Q9NR21 331 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
SNF8-215ENST00000515572 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 TEX13DA0A0J9YY54 714 aaPredicted RBP9.37□□□□□ -0.91
SNF8-215ENST00000515572 ATG12O94817 140 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 CNIH1O95406 144 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 MAS1LP35410 378 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 KRTAP10-3P60369 221 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
SNF8-215ENST00000515572 PJVKQ0ZLH3 352 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 FXYD3Q14802 87 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 RBMS2Q15434 407 aaKnown RBP9.37□□□□□ -0.91
SNF8-215ENST00000515572 DMBX1Q8NFW5 382 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 OR4X2Q8NGF9 303 aa9.37□□□□□ -0.91
SNF8-215ENST00000515572 SGMS2Q8NHU3 365 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms