RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SPIN2BQ9BPZ2 258 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 DIABLOQ9NR28 239 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 PEF1Q9UBV8 284 aaKnown RBP10.51□□□□□ -0.73
TCOF1-215ENST00000515516 A0A0A6YYH2 397 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 A6NJ64 397 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 SAA1P0DJI8 122 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-215ENST00000515516 TIMM50Q3ZCQ8 353 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 SLC25A42Q86VD7 318 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 BEST4Q8NFU0 473 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 VSTM2AQ8TAG5 236 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 RNF167Q9H6Y7 350 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 ZNF430Q9H8G1 570 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-215ENST00000515516 SPATA2Q9UM82 520 aa10.5□□□□□ -0.73
TCOF1-215ENST00000515516 SSX5O60225 188 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 TMEM127O75204 238 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 ATP5G2Q06055 141 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-215ENST00000515516 RPEL1Q2QD12 228 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 ZNF343Q6P1L6 599 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 ZNF66Q6ZN08 573 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 OVCH2Q7RTZ1 564 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 CROCCP3Q8IVE0 287 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 ADAD2Q8NCV1 583 aaKnown RBP10.49□□□□□ -0.73
TCOF1-215ENST00000515516 OR5H6Q8NGV6 325 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 SNAPC3Q92966 411 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 VCX3AQ9NNX9 186 aa10.49□□□□□ -0.73
TCOF1-215ENST00000515516 IGKV1D-13A0A0B4J2D9 117 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 DPPA5A6NC42 116 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 FAM223BA6NKX1 122 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 H0Y980 276 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 OR2A4O95047 310 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 IGKV1-13P0DP09 117 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 FCGR2CP31995 323 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 KIR2DS2P43631 304 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 CBX5P45973 191 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 RPL30P62888 115 aaKnown RBP10.48□□□□□ -0.73
TCOF1-215ENST00000515516 DYRK1AQ13627 763 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 MRGPRG-AS1Q2M3A8 158 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 HOGA1Q86XE5 327 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 FAM223AQ8IWN6 122 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 MFSD4AQ8N468 514 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 SECTM1Q8WVN6 248 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 OR2A7Q96R45 310 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 AIFM2Q9BRQ8 373 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 TAS2R8Q9NYW2 309 aa10.48□□□□□ -0.73
TCOF1-215ENST00000515516 HRASP01112 189 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 IGLV1-51P01701 117 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 IGLV2-14P01704 120 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 RHOGP84095 191 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 DEFA5Q01523 94 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 HAPLN4Q86UW8 402 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 SGPP2Q8IWX5 399 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 TTC9CQ8N5M4 171 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 GVQW1Q8N7I0 195 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 ZBTB34Q8NCN2 500 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 SLC25A38Q96DW6 304 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 S100A16Q96FQ6 103 aaKnown RBP10.47□□□□□ -0.73
TCOF1-215ENST00000515516 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 ZMAT4Q9H898 229 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 PEMTQ9UBM1 199 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
TCOF1-215ENST00000515516 TRIM64CA6NLI5 447 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 TNFSF12O43508 249 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 KBTBD11O94819 623 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 PRH1P02810 166 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 FRMD6-AS1P0C7T7 363 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 MAS1LP35410 378 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 RPL27AP46776 148 aaKnown RBP10.46□□□□□ -0.73
TCOF1-215ENST00000515516 EXOSC2Q13868 293 aaKnown RBP10.46□□□□□ -0.73
TCOF1-215ENST00000515516 MSMO1Q15800 293 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 FAM209BQ5JX69 171 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 VKORC1L1Q8N0U8 176 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 OR13F1Q8NGS4 319 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 FYTTD1Q96QD9 318 aaKnown RBP10.46□□□□□ -0.73
TCOF1-215ENST00000515516 SLC5A7Q9GZV3 580 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 AKIP1Q9NQ31 210 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 IFT46Q9NQC8 304 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.73
TCOF1-215ENST00000515516 A0A087WXM4 84 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 AIREO43918 545 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 DHFRP00374 187 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 PPYP01298 95 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 FCER2P06734 321 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 FXYD4P59646 89 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 CATR1Q13166 79 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 C10orf55Q5SWW7 151 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 SSX9Q7RTT3 188 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 TMEM167AQ8TBQ9 72 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 BORCS5Q969J3 196 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
TCOF1-215ENST00000515516 TRBV9A0A0B4J1U6 114 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 HMX3A6NHT5 357 aa10.44□□□□□ -0.74
TCOF1-215ENST00000515516 XRCC3O43542 346 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms