RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 C19orf35Q6ZS72 473 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 TMEM17Q86X19 198 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 CROCCP3Q8IVE0 287 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 OR5AP2Q8NGF4 316 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 OR5M8Q8NGP6 311 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 DLX4Q92988 240 aaPredicted RBP8.89□□□□□ -0.99
VCAN-212ENST00000515397 PHB2Q99623 299 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 SLC5A7Q9GZV3 580 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 ZNF430Q9H8G1 570 aaPredicted RBP8.89□□□□□ -0.99
VCAN-212ENST00000515397 EHFQ9NZC4 300 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 SCOCQ9UIL1 159 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 PRELID3BQ9Y3B1 194 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 SULT1C2O00338 296 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 DUS4LO95620 317 aaKnown RBP8.88□□□□□ -0.99
VCAN-212ENST00000515397 PPYP01298 95 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 RPA2P15927 270 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 ELK1P19419 428 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 PRSS3P35030 304 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 FHL3Q13643 280 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 CDK10Q15131 360 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 CTF1Q16619 201 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 REC114Q7Z4M0 266 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 ANKRD13BQ86YJ7 626 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 LYSMD2Q8IV50 215 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 TEX45Q8NA69 505 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 POC5Q8NA72 575 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 RHOVQ96L33 236 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 PRR25Q96S07 402 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 MCRIP2Q9BUT9 160 aaKnown RBP8.88□□□□□ -0.99
VCAN-212ENST00000515397 COA4Q9NYJ1 87 aa8.88□□□□□ -0.99
VCAN-212ENST00000515397 HMX3A6NHT5 357 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 E7EUB6 86 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 LINC01619G3V211 115 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 SLC22A5O76082 557 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
VCAN-212ENST00000515397 CD40LGP29965 261 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 ECI1P42126 302 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 CBX5P45973 191 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 RORCP51449 518 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 RUNX1Q01196 453 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 EGFEM1PQ0D2K5 195 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 ZNF818PQ6ZRF7 136 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 TCTEX1D1Q8N7M0 179 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 OR51H1Q8NH63 302 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 OSR1Q8TAX0 266 aaPredicted RBP8.87□□□□□ -0.99
VCAN-212ENST00000515397 GIMAP1Q8WWP7 306 aa8.87□□□□□ -0.99
VCAN-212ENST00000515397 SRSF12Q8WXF0 261 aaKnown RBP8.87□□□□□ -0.99
VCAN-212ENST00000515397 HSD17B10Q99714 261 aaKnown RBP8.87□□□□□ -0.99
VCAN-212ENST00000515397 ZNF2Q9BSG1 426 aaPredicted RBP8.87□□□□□ -0.99
VCAN-212ENST00000515397 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 SMIM31A0A1B0GVY4 71 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 MPPED1O15442 326 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 TMEM127O75204 238 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 TRBV12-3P01733 135 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 OR8U8P0C7N1 319 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 GNRHRP30968 328 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 HRH1P35367 487 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 ALDH3B2P48448 385 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 DGCR2P98153 550 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 C9orf66Q5T8R8 295 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 ZNF66Q6ZN08 573 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 OVCH2Q7RTZ1 564 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 SPAG16Q8N0X2 631 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 OR5H2Q8NGV7 314 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 KCTD12Q96CX2 325 aaKnown RBP8.86□□□□□ -0.99
VCAN-212ENST00000515397 MRPS26Q9BYN8 205 aaKnown RBP8.86□□□□□ -0.99
VCAN-212ENST00000515397 ADAM30Q9UKF2 790 aa8.86□□□□□ -0.99
VCAN-212ENST00000515397 C13orf42A0A1B0GVH6 325 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 A0A1B0GW64 132 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 OVOL1O14753 267 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 ACTL6BO94805 426 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 OR2A4O95047 310 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 GABARAPO95166 117 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 APOA1P02647 267 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 HSPB1P04792 205 aaKnown RBP8.85□□□□□ -0.99
VCAN-212ENST00000515397 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
VCAN-212ENST00000515397 HERV-K104P61576 105 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 DYRK1AQ13627 763 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 SPCS2Q15005 226 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 PYHIN1Q6K0P9 492 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 DHRS11Q6UWP2 260 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 GPR141Q7Z602 305 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 ADAD2Q8NCV1 583 aaKnown RBP8.85□□□□□ -0.99
VCAN-212ENST00000515397 OR4S2Q8NH73 311 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 GPX8Q8TED1 209 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 FYTTD1Q96QD9 318 aaKnown RBP8.85□□□□□ -0.99
VCAN-212ENST00000515397 OR2A7Q96R45 310 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 GPR61Q9BZJ8 451 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 ANAPC10Q9UM13 185 aa8.85□□□□□ -0.99
VCAN-212ENST00000515397 M0QYG6 137 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 SAP30O75446 220 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 LY86O95711 162 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 REG1AP05451 166 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 ZNF182P17025 639 aaPredicted RBP8.84□□□□□ -0.99
VCAN-212ENST00000515397 NAT1P18440 290 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 ZNF45Q02386 682 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms