RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MBD2Q9UBB5 411 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 UBQLN2Q9UHD9 624 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 FAM181BA6NEQ2 426 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 C12orf77C9JDV5 145 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 LY6LH3BQJ8 138 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 BUB1B-PAK6H3BSN5 160 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 F2RL2O00254 374 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 PGLYRP1O75594 196 aaPredicted RBP6.71□□□□□ -1.34
CCL28-204ENST00000514421 DEDDO75618 318 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 F2RP25116 425 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 SSTR5P35346 364 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 CEACAM3P40198 252 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 COMPP49747 757 aaPredicted RBP6.71□□□□□ -1.34
CCL28-204ENST00000514421 LOXL3P58215 753 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 RPL15P61313 204 aaKnown RBP6.71□□□□□ -1.34
CCL28-204ENST00000514421 FOXL1Q12952 345 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 IAH1Q2TAA2 248 aaPredicted RBP6.71□□□□□ -1.34
CCL28-204ENST00000514421 LRRC75BQ2VPJ9 315 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 HLA-DRB5Q30154 266 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 TMEM30BQ3MIR4 351 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 Q3ZCU0 254 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 PHLDA2Q53GA4 152 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 NMSQ5H8A3 153 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 LDLRAD2Q5SZI1 272 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 C5orf24Q7Z6I8 188 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 TBC1D26Q86UD7 250 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 CMTM1Q8IZ96 169 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 DYNAPQ8N1N2 210 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
CCL28-204ENST00000514421 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 OR10V1Q8NGI7 309 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 OR4D5Q8NGN0 318 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 PIFOQ8TCI5 191 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 SCARB1Q8WTV0 552 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 RRNAD1Q96FB5 475 aaKnown RBP6.71□□□□□ -1.34
CCL28-204ENST00000514421 C11orf1Q9H5F2 150 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 GFOD1Q9NXC2 390 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 RDH8Q9NYR8 311 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 PRR13Q9NZ81 148 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 OR1A1Q9P1Q5 309 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 PSG11Q9UQ72 335 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 HILPDAQ9Y5L2 63 aa6.71□□□□□ -1.34
CCL28-204ENST00000514421 FAM25EA8MYX2 175 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 OOSP1A8MZH6 123 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 H3BUX3 64 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 ITGB1BP1O14713 200 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 GPR137BO60478 399 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 TSC22D2O75157 780 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 IGHV3-7P01780 117 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 HBZP02008 142 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 HOXB5P09067 269 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 PAX6P26367 422 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 S100GP29377 79 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 BRS3P32247 399 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 RAB13P51153 203 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 DYNLT3P51808 116 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 LUMP51884 338 aaPredicted RBP6.7□□□□□ -1.34
CCL28-204ENST00000514421 AP2S1P53680 142 aaPredicted RBP6.7□□□□□ -1.34
CCL28-204ENST00000514421 RAB32Q13637 225 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 SP6Q3SY56 376 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 UTF1Q5T230 341 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 C12orf54Q6X4T0 127 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 LYZL2Q7Z4W2 148 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 SELENOHQ8IZQ5 122 aaKnown RBP6.7□□□□□ -1.34
CCL28-204ENST00000514421 LINC00311Q8N616 119 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 TCTEX1D1Q8N7M0 179 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 C8orf31Q8N9H6 132 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 OR1L1Q8NH94 360 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 UBALD1Q8TB05 177 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 SECTM1Q8WVN6 248 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 GALMQ96C23 342 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 OR2S2Q9NQN1 319 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 CCL28Q9NRJ3 127 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 VPREB3Q9UKI3 123 aa6.7□□□□□ -1.34
CCL28-204ENST00000514421 AMMECR1Q9Y4X0 333 aaPredicted RBP6.7□□□□□ -1.34
CCL28-204ENST00000514421 IGHV3-43A0A0B4J1X8 118 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 A0A1B0GUS0 222 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 TAAR5O14804 337 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 PITX3O75364 302 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 MBPP02686 304 aaPredicted RBP6.69□□□□□ -1.34
CCL28-204ENST00000514421 IGHV3-43DP0DP04 118 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 VDAC1P21796 283 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 ARHGDIBP52566 201 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 LY6EQ16553 131 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 LRRC37A5PQ49AS3 106 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 MORN2Q502X0 79 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 TPTE2P1Q5T6R2 138 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 CCDC144NLQ6NUI1 221 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 PRR18Q8N4B5 295 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 FAM71E2Q8N5Q1 922 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 ZNF645Q8N7E2 425 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 SLC35G3Q8N808 338 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 OR10X1Q8NGY0 326 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 OR1S1Q8NH92 325 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 ST8SIA2Q92186 375 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 RBPMSQ93062 196 aaKnown RBP6.69□□□□□ -1.34
CCL28-204ENST00000514421 LEAP2Q969E1 77 aa6.69□□□□□ -1.34
CCL28-204ENST00000514421 LSM10Q969L4 123 aaKnown RBP6.69□□□□□ -1.34
CCL28-204ENST00000514421 SPIN2AQ99865 258 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms