RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 CLEC6AQ6EIG7 209 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 DYNAPQ8N1N2 210 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 OR52E4Q8NGH9 312 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 NAT8Q9UHE5 227 aa0.83□□□□□ -2.28
TRAPPC11-210ENST00000513600 NUMA1Q14980 2115 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 ERICH2A1L162 156 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 MKRN2OSH3BPM6 223 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 ADAP1O75689 374 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 BRI3O95415 125 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 MT-CO2P00403 227 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 CASQ1P31415 396 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 KDELR2P33947 212 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 AKR1C1Q04828 323 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 ANGPT1Q15389 498 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 DCXRQ7Z4W1 244 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 SPATA24Q86W54 205 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 BLIDQ8IZY5 108 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 ATP6V1G3Q96LB4 118 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 TMEM109Q9BVC6 243 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 CHMP4BQ9H444 224 aaKnown RBP0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 ZNHIT6Q9NWK9 470 aaKnown RBP0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 PCYT1BQ9Y5K3 369 aaPredicted RBP0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 GMEB1Q9Y692 573 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 TMEM94Q12767 1356 aa0.82□□□□□ -2.28
TRAPPC11-210ENST00000513600 TMEM213A2RRL7 107 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 F8VZ95 297 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 CD151P48509 253 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 RAB14P61106 215 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 SLAMF1Q13291 335 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 GID4Q8IVV7 300 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 OR5AK3PQ8NH89 298 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 RAB2BQ8WUD1 216 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 PPCDCQ96CD2 204 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 REG4Q9BYZ8 158 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 SPACA1Q9HBV2 294 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 CD300AQ9UGN4 299 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 CFAP45Q9UL16 551 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 FLT4P35916 1363 aa0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 LRPPRCP42704 1394 aaKnown RBP0.81□□□□□ -2.28
TRAPPC11-210ENST00000513600 LINC00854A0A1B0GVQ3 168 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 TMEM269A0A1B0GVZ9 245 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 MEIS3P1A6NDR6 274 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 C9JCJ5 164 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 ATP6V1G2O95670 118 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 PMS2P3Q13401 168 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 RASSF6Q6ZTQ3 369 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 CRLF3Q8IUI8 442 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 FAM19A2Q8N3H0 131 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 C1orf109Q9NX04 203 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 MICAL3Q7RTP6 2002 aa0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 BAZ2BQ9UIF8 2168 aaKnown RBP0.8□□□□□ -2.28
TRAPPC11-210ENST00000513600 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 WDR90Q96KV7 1748 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 TRPC5OSA6NMA1 111 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 GEMIN2O14893 280 aaKnown RBP0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 TOX3O15405 576 aaPredicted RBP0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 UBBP0CG47 229 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 SLCO1A2P46721 670 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 FABP5Q01469 135 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 ZNHIT3Q15649 155 aaPredicted RBP0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 FAM45BPQ6NSW5 357 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 OR10D3Q8NH80 312 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 ACOT12Q8WYK0 555 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 TESCQ96BS2 214 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 RBP7Q96R05 134 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 PIK3R4Q99570 1358 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 NUP160Q12769 1436 aa0.79□□□□□ -2.28
TRAPPC11-210ENST00000513600 AZIN1O14977 448 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 ATP8B1O43520 1251 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 CALUO43852 315 aaPredicted RBP0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 NDUFS6O75380 124 aaKnown RBP0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 YEATS4O95619 227 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 ORM1P02763 201 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 TFPTP0C1Z6 253 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 PSMB6P28072 239 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 LRRC26Q2I0M4 334 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 PLPPR5Q32ZL2 321 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 PDPK2PQ6A1A2 396 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 GPHB5Q86YW7 130 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 RPP25LQ8N5L8 163 aaKnown RBP0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 OR7G1Q8NGA0 311 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 OR5L1Q8NGL2 311 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 NDEL1Q9GZM8 345 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 CHST6Q9GZX3 395 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 INTS1Q8N201 2190 aaKnown RBP0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 RAD50Q92878 1312 aa0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 NUP153P49790 1475 aaKnown RBP0.78□□□□□ -2.28
TRAPPC11-210ENST00000513600 TMED7-TICAM2A0A0A6YYA0 188 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 GOLGA6L10A6NI86 522 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 FTCDNL1E5RQL4 147 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 SMLR1H3BR10 107 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 RD3LP0DJH9 198 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 CXCL2P19875 107 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 CXCL3P19876 107 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 MAP3K7CLP57077 242 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 DMTNQ08495 405 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 C4orf26Q17RF5 130 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 SDHAF4Q5VUM1 108 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 BOD1L2Q8IYS8 172 aa0.77□□□□□ -2.29
TRAPPC11-210ENST00000513600 UMODL1-AS1Q8N2C9 162 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms