RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 WI2-2373I1.2A0A1W2PRP0 233 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 LINC00473A8K010 186 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 SULT1C2O00338 296 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 TNFSF12O43508 249 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 GSTZ1O43708 216 aaPredicted RBP5.06□□□□□ -1.6
KDM3B-208ENST00000512928 SOX15O60248 233 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 HPGDSO60760 199 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 FCGR3BO75015 233 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 ACTL6BO94805 426 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 LY86O95711 162 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 IGLV1-40P01703 118 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 TRGV3P03979 118 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 OR8U8P0C7N1 319 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 RRASP10301 218 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 PTHLHP12272 177 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 PTBP1P26599 531 aaKnown RBP eCLIP5.06□□□□□ -1.6
KDM3B-208ENST00000512928 DUTP33316 252 aaKnown RBP5.06□□□□□ -1.6
KDM3B-208ENST00000512928 LGALS7P47929 136 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 FXYD4P59646 89 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 DGCR2P98153 550 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 PJVKQ0ZLH3 352 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 ZNF79Q15937 498 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 VMA21Q3ZAQ7 101 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 TMEM69Q5SWH9 247 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 C9orf66Q5T8R8 295 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 PYHIN1Q6K0P9 492 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 MZT2AQ6P582 158 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 CNIH2Q6PI25 160 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 ZNF562Q6V9R5 426 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 HOGA1Q86XE5 327 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 MFSD4AQ8N468 514 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 GVQW1Q8N7I0 195 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 MINDY2Q8NBR6 621 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 OR5T1Q8NG75 326 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 OR6Q1Q8NGQ2 317 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 SECTM1Q8WVN6 248 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 TCTEX1D2Q8WW35 142 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 TRIM63Q969Q1 353 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 ABHD1Q96SE0 405 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 COA4Q9NYJ1 87 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 TAS2R8Q9NYW2 309 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 COMMD3Q9UBI1 195 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 MRPS7Q9Y2R9 242 aaKnown RBP5.06□□□□□ -1.6
KDM3B-208ENST00000512928 PRELID3BQ9Y3B1 194 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 DNAH3Q8TD57 4116 aa5.06□□□□□ -1.6
KDM3B-208ENST00000512928 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 NOTCH3Q9UM47 2321 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 IGKV1D-13A0A0B4J2D9 117 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 C13orf42A0A1B0GVH6 325 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 ANKRD34BA5PLL1 514 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SRRM4A7MD48 611 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 LINC01619G3V211 115 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 K7EIL1 84 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 ARPC1BO15143 372 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 CREBL2O60519 120 aaPredicted RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 NOL3O60936 208 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SAP30O75446 220 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SLC22A5O76082 557 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 IGLV2-23P01705 113 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 LGALS1P09382 135 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 IGKV1-13P0DP09 117 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 EGR2P11161 476 aaPredicted RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 AADACP22760 399 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 FCGR2CP31995 323 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 TNFSF8P32971 234 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 ECI1P42126 302 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SLURP1P55000 103 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 HERV-K104P61576 105 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 DEFA5Q01523 94 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SSBP1Q04837 148 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 AKIRIN2Q53H80 203 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 TMEM177Q53S58 311 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 TMEM17Q86X19 198 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 VKORC1L1Q8N0U8 176 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 POC5Q8NA72 575 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 MCFD2Q8NI22 146 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 OSR1Q8TAX0 266 aaPredicted RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SMIM4Q8WVI0 70 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 GPHA2Q96T91 129 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 SLA2Q9H6Q3 261 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 PTTG2Q9NZH5 202 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 ZMAT5Q9UDW3 170 aaKnown RBP5.05□□□□□ -1.6
KDM3B-208ENST00000512928 MTFP1Q9UDX5 166 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 NUBP2Q9Y5Y2 271 aa5.05□□□□□ -1.6
KDM3B-208ENST00000512928 IGHV4OR15-8A0A075B7B6 117 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 A0A087WW49 117 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 MSGN1A6NI15 193 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 I3L521 148 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 OVOL1O14753 267 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 PPYP01298 95 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 IGLV2-14P01704 120 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 CD74P04233 296 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 SAA1P0DJI8 122 aaPredicted RBP5.04□□□□□ -1.6
KDM3B-208ENST00000512928 CBX5P45973 191 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
KDM3B-208ENST00000512928 UBE2KP61086 200 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 RPL30P62888 115 aaKnown RBP5.04□□□□□ -1.6
KDM3B-208ENST00000512928 MRPS10P82664 201 aaKnown RBP5.04□□□□□ -1.6
KDM3B-208ENST00000512928 CD69Q07108 199 aa5.04□□□□□ -1.6
KDM3B-208ENST00000512928 EGFEM1PQ0D2K5 195 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms