RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SELENOPP49908 381 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 SNRPD2P62316 118 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 RPS24P62847 133 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 GAGE4Q13068 117 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 MORN5Q5VZ52 161 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 OGFOD2Q6N063 350 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 CLEC19AQ6UXS0 136 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 RBM23Q86U06 439 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 LINC00471Q8N535 108 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 ANKRD29Q8N6D5 301 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 TET1Q8NFU7 2136 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 MAGOHBQ96A72 148 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 C18orf12Q96KH6 178 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 PEBP4Q96S96 227 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZNF436Q9C0F3 470 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 RPUSD1Q9UJJ7 312 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 MED31Q9Y3C7 131 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 COL4A6Q14031 1691 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 MICAL3Q7RTP6 2002 aa4.88□□□□□ -1.63
TRAPPC11-209ENST00000512476 DNAH12Q6ZR08 3092 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 hCG_1818297A0A087WSY0 165 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 WI2-2373I1.2A0A1W2PRP0 233 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 TMEM218A2RU14 115 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 K7N7A8 449 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 RBFOX2O43251 390 aaKnown RBP eCLIP4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 TRAF3IP2O43734 574 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 AQP1P29972 269 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 CXCL12P48061 93 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 ATP5G3P48201 142 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 SLC18A1P54219 525 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 GFERP55789 205 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 H2BFSP57053 126 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 NCS1P62166 190 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 ARFRP1Q13795 201 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 YIPF7Q8N8F6 280 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZDHHC22Q8N966 263 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZNF418Q8TF45 676 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 FAM3DQ96BQ1 224 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 CXorf21Q9HAI6 301 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 XCL2Q9UBD3 114 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 WASHC3Q9Y3C0 194 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 NLRC5Q86WI3 1866 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 BRCA2P51587 3418 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 TEX50A0A1B0GTY4 177 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 DHRS12A0PJE2 317 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 RIIAD1A6NNX1 92 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 KNCNA6PVL3 124 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 COPEO14579 308 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 TNFSF13O75888 250 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 GADD45GO95257 159 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 OPN1SWP03999 348 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 SMIM17P0DL12 118 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 PSMB9P28065 219 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 DEFB106AQ8N104 65 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 ZIC4Q8N9L1 334 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 EXOSC3Q9NQT5 275 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 UGT2A1Q9Y4X1 527 aa4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 COL4A4P53420 1690 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-209ENST00000512476 PATJQ8NI35 1801 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 PTPRDP23468 1912 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 BORCS7-ASMTA0A0B4J1R7 106 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 I3L521 148 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 TOMM40O96008 361 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 SOD3P08294 240 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 CD48P09326 243 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 PSG2P11465 335 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 CSRP1P21291 193 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 NCBP2P52298 156 aaKnown RBP eCLIP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 HERV-K104P61576 105 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 DEFB103AP81534 67 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 SLC10A1Q14973 349 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 HERPUD1Q15011 391 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 EBPQ15125 230 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 TIMM50Q3ZCQ8 353 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 C6orf99Q4VX62 202 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 PABPC1L2AQ5JQF8 200 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 C9orf40Q8IXQ3 194 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 OR2T27Q8NH04 317 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 ISOC1Q96CN7 298 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 IGF2BP2-AS1Q96M15 143 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 SULT4A1Q9BR01 284 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 ANAPC13Q9BS18 74 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 SNRNP25Q9BV90 132 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 OR8D2Q9GZM6 311 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 PDFQ9HBH1 243 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 MMP26Q9NRE1 261 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 NAT8BQ9UHF3 227 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 A8MT66 165 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 ISLRO14498 428 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 MPC2O95563 127 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 DBIP07108 87 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 MRPL3P09001 348 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 RBM11P57052 281 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 COPZ1P61923 177 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 PAGE3Q5JUK9 113 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 SBSNQ6UWP8 590 aa4.86□□□□□ -1.63
TRAPPC11-209ENST00000512476 C11orf53Q8IXP5 236 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms