RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 COMMD6Q7Z4G1 85 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 MRPL55Q7Z7F7 128 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 FNDC9Q8TBE3 224 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 NT5CQ8TCD5 201 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR5P3Q8WZ94 311 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 DLX4Q92988 240 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 SMIM8Q96KF7 97 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 RTBDNQ9BSG5 229 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 PSMG3Q9BT73 122 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 ADAT1Q9BUB4 502 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 PBDC1Q9BVG4 233 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 HES4Q9HCC6 221 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 LYRM2Q9NU23 88 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 DNAJC15Q9Y5T4 150 aa4.15□□□□□ -1.75
TRAPPC11-208ENST00000511955 FAM208BQ5VWN6 2430 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 IFITM10A6NMD0 228 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF850A8MQ14 1090 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 FABP5P3A8MUU1 101 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 MCRIP1C9JLW8 97 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 SMKR1H3BMG3 65 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 K7ENP7 123 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 UPK1AO00322 258 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 FGF17O60258 216 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 YIF1AO95070 293 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 CELA2AP08217 269 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 IL3P08700 152 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR5AL1P0C617 328 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 PSG1P11464 419 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 TNFRSF1BP20333 461 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 GPR183P32249 361 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 RPL38P63173 70 aaKnown RBP4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 MESTQ5EB52 335 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 Q6ZWC4 215 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZFP41Q8N8Y5 198 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 THEM6Q8WUY1 208 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 TWIST2Q8WVJ9 160 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 TMEM101Q96IK0 257 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 TEX37Q96LM6 180 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR10A2Q9H208 303 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 TUBA4BQ9H853 241 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 EXOSC3Q9NQT5 275 aaKnown RBP4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF71Q9NQZ8 489 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 COMMD9Q9P000 198 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 ST3GAL6Q9Y274 331 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 BSNQ9UPA5 3926 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF462Q96JM2 2506 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 MYO18BQ8IUG5 2567 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 CNTRLQ7Z7A1 2325 aa4.14□□□□□ -1.75
TRAPPC11-208ENST00000511955 NRASP01111 189 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TTRP02766 147 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 RAB5AP20339 215 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 NFYAP23511 347 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 AGTR1P30556 359 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TSFMP43897 325 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 EIF5AP63241 154 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 SSX1Q16384 188 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TMEM244Q5VVB8 128 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF660Q6AZW8 331 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 SLC18B1Q6NT16 456 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 KCTD18Q6PI47 426 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GDPGP1Q6ZNW5 385 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GOLT1AQ6ZVE7 132 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TMUB2Q71RG4 321 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 MRGPREQ86SM8 312 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAPTQ8N292 157 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TEX45Q8NA69 505 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR11G2Q8NGC1 345 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR10AD1Q8NGE0 317 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 PIFOQ8TCI5 191 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF418Q8TF45 676 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 S100A13Q99584 98 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TAF9BQ9HBM6 251 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 SERTAD4Q9NUC0 356 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 COMMD3Q9UBI1 195 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 NAT8BQ9UHF3 227 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 FLNCQ14315 2725 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 NBASA2RRP1 2371 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GCN1Q92616 2671 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 A0A087WUU8 490 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 TRAV39A0A0B4J263 110 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAGE12JA6NER3 117 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 PHOX2AO14813 284 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 NCR1O76036 304 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAGE7O76087 117 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 CDRT1O95170 752 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 LYPD3O95274 346 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 AIFM1O95831 613 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 PRB1P04280 392 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAGE12FP0CL80 117 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAGE12GP0CL81 117 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAGE12IP0CL82 117 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 ORM2P19652 201 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 RPS25P62851 125 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 SRSF4Q08170 494 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 GAGE4Q13068 117 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
TRAPPC11-208ENST00000511955 RGNQ15493 299 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms