RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 IGHV2-70DA0A0C4DH43 119 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 hCG_38984A0A1B0GV85 526 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ZNF840PA6NDX5 716 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 H3BMG7 143 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 CCL22O00626 93 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 SMAD7O15105 426 aaKnown RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 GYPBP06028 91 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 CEACAM1P13688 526 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 KIR3DS1Q14943 382 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TMEM155Q4W5P6 130 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 GDF6Q6KF10 455 aaPredicted RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 SFTA2Q6UW10 78 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ACP7Q6ZNF0 438 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 SLC16A11Q8NCK7 471 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 NOXO1Q8NFA2 376 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 GPBAR1Q8TDU6 330 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 GLMPQ8WWB7 406 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 VSIG2Q96IQ7 327 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 GFRA4Q9GZZ7 299 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ZNF703Q9H7S9 590 aaPredicted RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 TSSC4Q9Y5U2 329 aaPredicted RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 PGPA6NDG6 321 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 LIPT2A6NK58 231 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 H3BSH0 61 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 RPL36A-HNRNPH2H7BZ11 118 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PLPP3O14495 311 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 UQCRQO14949 82 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PPYP01298 95 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 CFIP05156 583 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PYYP10082 97 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 CCL2P13500 99 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 MYOD1P15172 320 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 FOXA1P55317 472 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ATP5EP2Q5VTU8 51 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TMEM219Q86XT9 240 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 C2orf73Q8N5S3 287 aaPredicted RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 GCSAMQ8N6F7 178 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ZNF645Q8N7E2 425 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TPRX1Q8N7U7 411 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 C15orf53Q8NAA6 179 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ZNF114Q8NC26 417 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 CLDND2Q8NHS1 167 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 KCNK17Q96T54 332 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 NPCDR1Q9BY65 106 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 FGFBP2Q9BYJ0 223 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 GNB4Q9HAV0 340 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 MGAMO43451 1857 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 IGHV2-26A0A0B4J1V2 119 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 LOC389332A0A1B0GUA5 103 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TISP43B9A030 160 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 SERF1AO75920 110 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PNLIPP16233 465 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 IL11P20809 199 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 FOLR3P41439 243 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PGFP49763 221 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 RAE1P78406 368 aaKnown RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 COL9A3Q14050 684 aaPredicted RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 C1orf100Q5SVJ3 147 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 TEX36Q5VZQ5 186 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 FAM90A2PQ658T7 463 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 SLC25A48Q6ZT89 311 aaKnown RBP3.08□□□□□ -1.92
USP53-205ENST00000509769 BTLAQ7Z6A9 289 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ZNF441Q8N8Z8 693 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 C10orf105Q8TEF2 133 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 ZDHHC16Q969W1 377 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 VSTM2LQ96N03 204 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 IMUPQ9GZP8 106 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 DECR2Q9NUI1 292 aa3.08□□□□□ -1.92
USP53-205ENST00000509769 PHIPQ8WWQ0 1821 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 TRAV13-1A0A0B4J241 112 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 K7EMI3 77 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 TIAF1O95411 115 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 APOHP02749 345 aaPredicted RBP3.07□□□□□ -1.92
USP53-205ENST00000509769 PVRP15151 417 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 CD46P15529 392 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 CRYBA4P53673 196 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 FGF8P55075 233 aaPredicted RBP3.07□□□□□ -1.92
USP53-205ENST00000509769 KISS1Q15726 138 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 MORN2Q502X0 79 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 Q6ZS52 159 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 WDR54Q9H977 334 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 MICAL3Q7RTP6 2002 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 IGHV2OR16-5A0A0B4J2B6 119 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 A0A0U1RQV1 116 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 A0A1W2PQF6 199 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 A0A1W2PRE2 83 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 H0YL77 283 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 HMGN4O00479 90 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 SYNGR3O43761 229 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 LILRA1O75019 489 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 UBE2BP63146 152 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 ZNF56Q15929 161 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 ZNF750Q32MQ0 723 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 TMEM177Q53S58 311 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 ADAMTSL4Q6UY14 1074 aa3.07□□□□□ -1.92
USP53-205ENST00000509769 MED25Q71SY5 747 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms