RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RAMP3O60896 148 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 LY86O95711 162 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF735P0CB33 412 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 SAA1P0DJI8 122 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 OR5H8P0DN80 308 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 PSMB8P28062 276 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 FCGR2CP31995 323 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 HRH1P35367 487 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 RFX2P48378 723 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 RPL23AP62750 156 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 CX3CL1P78423 397 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 MRPS15P82914 257 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 PITPNAQ00169 270 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 DYRK1AQ13627 763 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 ARL6IP1Q15041 203 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 CDK10Q15131 360 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF79Q15937 498 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 DEFB136Q30KP8 78 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 AADACL3Q5VUY0 350 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 LHFPL1Q86WI0 220 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 NDUFA11Q86Y39 141 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 C1QL4Q86Z23 238 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 OR5AP2Q8NGF4 316 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 OR8H1Q8NGG4 311 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 SGMS2Q8NHU3 365 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM110DQ8TAY7 271 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 ACOT12Q8WYK0 555 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 TRIM63Q969Q1 353 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 PHF21AQ96BD5 680 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 MOB3AQ96BX8 217 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 AKR1E2Q96JD6 320 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 CMTM3Q96MX0 182 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 BCL7BQ9BQE9 202 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 DCUN1D5Q9BTE7 237 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 OR51J1Q9H342 316 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 PARP11Q9NR21 331 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 DIABLOQ9NR28 239 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 TAS2R8Q9NYW2 309 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 KLK11Q9UBX7 282 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 WSB1Q9Y6I7 421 aa5.61□□□□□ -1.51
TOPBP1-207ENST00000509162 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 DBX1A6NMT0 343 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 NUDT19A8MXV4 375 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 E7EUB6 86 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 G3V4G9 280 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 AP4M1O00189 453 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 SPDEFO95238 335 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 CRYZL1O95825 349 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 IGKV1-39P01597 117 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 IGHG4P01861 327 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 IGKV1D-39P04432 117 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 HLA-DMAP28067 261 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 GNRHRP30968 328 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 RCVRNP35243 200 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 SOX6P35712 828 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 THBS3P49746 956 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 FXYD4P59646 89 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 ARPC4P59998 168 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 CD69Q07108 199 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 C2orf68Q2NKX9 166 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 KCTD9Q7L273 389 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 TMEM17Q86X19 198 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 VKORC1L1Q8N0U8 176 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 MINDY2Q8NBR6 621 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 SECTM1Q8WVN6 248 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 S100A16Q96FQ6 103 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 HARBI1Q96MB7 349 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 CLCC1Q96S66 551 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 ALX4Q9H161 411 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 MMP27Q9H306 513 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 NECAP2Q9NVZ3 263 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 EHFQ9NZC4 300 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF221Q9UK13 617 aa5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 MRPS7Q9Y2R9 242 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-207ENST00000509162 TRAV3A0A0B4J244 114 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM25AB3EWG3 89 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM25CB3EWG5 89 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 FAM25GB3EWG6 89 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 TEX22C9J3V5 150 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 H7C2Y5 167 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 FCGR3BO75015 233 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 RBBP9O75884 186 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 S1PR2O95136 353 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 CD74P04233 296 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 CD3DP04234 171 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 IL6RP08887 468 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 CSF1P09603 554 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 PRSS3P35030 304 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 RANBP1P43487 201 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 CBX5P45973 191 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 LUMP51884 338 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 GNB1P62873 340 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 FHL3Q13643 280 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 MSMO1Q15800 293 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 ECSCRQ19T08 205 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 BEAN1Q3B7T3 259 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF585BQ52M93 769 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 VAX1Q5SQQ9 334 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms