RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 IGLL1P15814 213 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 RAB25P57735 213 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 TNXAQ16473 311 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 RNASE12Q5GAN4 147 aaKnown RBP13.22□□□□□ -0.29
CLDND1-219ENST00000508659 MFSD4AQ8N468 514 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 TEX45Q8NA69 505 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 VSTM2AQ8TAG5 236 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 RAX2Q96IS3 184 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 UBE2E2Q96LR5 201 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 DUX3Q96PT4 197 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 GPHA2Q96T91 129 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 PHB2Q99623 299 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 VSIG4Q9Y279 399 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 NUBP2Q9Y5Y2 271 aa13.22□□□□□ -0.29
CLDND1-219ENST00000508659 ACTL6BO94805 426 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 RAB9AP51151 201 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 SSBP2P81877 361 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-219ENST00000508659 PRSS8Q16651 343 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 KPRPQ5T749 579 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-219ENST00000508659 AADACL3Q5VUY0 350 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 ZNF818PQ6ZRF7 136 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 LAX1Q8IWV1 398 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 OR6F1Q8NGZ6 308 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 CASTOR1Q8WTX7 329 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 C15orf40Q8WUR7 153 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 MOB3AQ96BX8 217 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 ISOC1Q96CN7 298 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 P2RX4Q99571 388 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.29
CLDND1-219ENST00000508659 H3BMQ9 156 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 TPPP2P59282 170 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 TSPAN5P62079 268 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 DHRS11Q6UWP2 260 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 VKORC1L1Q8N0U8 176 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 SPAG16Q8N0X2 631 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 OR51H1Q8NH63 302 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 OR5B12Q96R08 314 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 GPR61Q9BZJ8 451 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 SLA2Q9H6Q3 261 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 GNB4Q9HAV0 340 aa13.2□□□□□ -0.3
CLDND1-219ENST00000508659 MPPED1O15442 326 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 WIPF1O43516 503 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 TPPPO94811 219 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 MMD2Q8IY49 270 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 CMTM1Q8IZ96 169 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 POC5Q8NA72 575 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 SRSF12Q8WXF0 261 aaKnown RBP13.19□□□□□ -0.3
CLDND1-219ENST00000508659 DPF1Q92782 380 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 TMEM68Q96MH6 324 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 MCRIP2Q9BUT9 160 aaKnown RBP13.19□□□□□ -0.3
CLDND1-219ENST00000508659 C6orf62Q9GZU0 229 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-219ENST00000508659 MIXL1Q9H2W2 232 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 ZNF430Q9H8G1 570 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-219ENST00000508659 ZNF355PQ9NSJ1 428 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 NOTCH1P46531 2555 aa13.19□□□□□ -0.3
CLDND1-219ENST00000508659 CCDC160A6NGH7 325 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 H3BUA1 57 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 RBFOX2O43251 390 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLDND1-219ENST00000508659 RAMP3O60896 148 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 KBTBD11O94819 623 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 OR2A4O95047 310 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 HRASP01112 189 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 RLN1P04808 185 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 GNRHRP30968 328 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
CLDND1-219ENST00000508659 LYSMD2Q8IV50 215 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 OR11H1Q8NG94 326 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 MS4A10Q96PG2 267 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 OR2A7Q96R45 310 aa13.18□□□□□ -0.3
CLDND1-219ENST00000508659 CTDSP2O14595 271 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 TRGV3P03979 118 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 APELAP0DMC3 54 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 BRWD1-AS2P59051 145 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 RUNX1Q01196 453 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 FHL3Q13643 280 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 KIAA0141Q14154 515 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-219ENST00000508659 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 RNASE10Q5GAN6 216 aaKnown RBP13.17□□□□□ -0.3
CLDND1-219ENST00000508659 VAX1Q5SQQ9 334 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 SSX9Q7RTT3 188 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 OR52I2Q8NH67 350 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 CD300LFQ8TDQ1 290 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 RHOVQ96L33 236 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 ABHD1Q96SE0 405 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 AIFM2Q9BRQ8 373 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
CLDND1-219ENST00000508659 MSGN1A6NI15 193 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 I3L521 148 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 M0QYG6 137 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 GPR31O00270 319 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 HPRT1P00492 218 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 IFNA6P05013 189 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
CLDND1-219ENST00000508659 OR8U8P0C7N1 319 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 TBPP20226 339 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 S100GP29377 79 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 TAS2R31P59538 309 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms