RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 FOXB2Q5VYV0 432 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 TEX38Q6PEX7 206 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 ZNF562Q6V9R5 426 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 Q6ZS46 218 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 LHFPL1Q86WI0 220 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 NDUFA11Q86Y39 141 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 SPAG16Q8N0X2 631 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 STPG2Q8N412 459 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 OR5AU1Q8NGC0 362 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 OR51H1Q8NH63 302 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 OR4A5Q8NH83 315 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 ABHD5Q8WTS1 349 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 S100ZQ8WXG8 99 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 TMEM68Q96MH6 324 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 RSRP1Q9BUV0 290 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 FBXL15Q9H469 300 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 MCUBQ9NWR8 336 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 SLC2A8Q9NY64 477 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 COMMD9Q9P000 198 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 COPZ2Q9P299 210 aa7.23□□□□□ -1.25
NUP54-207ENST00000508583 C14orf166Q9Y224 244 aaKnown RBP7.23□□□□□ -1.25
NUP54-207ENST00000508583 ANK2Q01484 3957 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 IGHV7-81A0A0B4J1V7 117 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 SH2D7A6NKC9 451 aaPredicted RBP7.22□□□□□ -1.25
NUP54-207ENST00000508583 CENPXA8MT69 81 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 PGLYRP1O75594 196 aaPredicted RBP7.22□□□□□ -1.25
NUP54-207ENST00000508583 FGF2P09038 288 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 RPA2P15927 270 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 F2RP25116 425 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 CNTFRP26992 372 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 SLC6A1P30531 599 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 MAS1LP35410 378 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 LINC00205P59089 165 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 RND3P61587 244 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 ZNF79Q15937 498 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 TMEM95Q3KNT9 176 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 PHLDA2Q53GA4 152 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 OR2B11Q5JQS5 317 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 CXorf66Q5JRM2 361 aaPredicted RBP7.22□□□□□ -1.25
NUP54-207ENST00000508583 IDO2Q6ZQW0 420 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 MMD2Q8IY49 270 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 OR4C16Q8NGL9 310 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 ARPC1AQ92747 370 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 RITA1Q96K30 269 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 SRRQ9GZT4 340 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 PARP11Q9NR21 331 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 SLC2A9Q9NRM0 540 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 PTTG2Q9NZH5 202 aa7.22□□□□□ -1.25
NUP54-207ENST00000508583 TSSC4Q9Y5U2 329 aaPredicted RBP7.22□□□□□ -1.25
NUP54-207ENST00000508583 TET2Q6N021 2002 aaPredicted RBP7.22□□□□□ -1.25
NUP54-207ENST00000508583 NAP1L6A6NFF2 107 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 MPPED1O15442 326 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 OR2A4O95047 310 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 CA2P00918 260 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 IGLV2-23P01705 113 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 SERPINE2P07093 398 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 CTSDP07339 412 aaPredicted RBP7.21□□□□□ -1.26
NUP54-207ENST00000508583 ELANEP08246 267 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 SAA1P0DJI8 122 aaPredicted RBP7.21□□□□□ -1.26
NUP54-207ENST00000508583 CRIP2P52943 208 aaPredicted RBP7.21□□□□□ -1.26
NUP54-207ENST00000508583 PPP5CP53041 499 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 PIGPP57054 158 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 RPL30P62888 115 aaKnown RBP7.21□□□□□ -1.26
NUP54-207ENST00000508583 CX3CL1P78423 397 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 FOXE3Q13461 319 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 FXYD3Q14802 87 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 CNPY1Q3B7I2 92 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 AKIRIN2Q53H80 203 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 KHDC1LQ5JSQ8 128 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 ZNF57Q68EA5 555 aaPredicted RBP7.21□□□□□ -1.26
NUP54-207ENST00000508583 TMEM65Q6PI78 240 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 CADM3Q8N126 398 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 DMBX1Q8NFW5 382 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 OR4F17Q8NGA8 305 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 OR4D10Q8NGI6 311 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 TRIM63Q969Q1 353 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 RBMXL1Q96E39 390 aaKnown RBP7.21□□□□□ -1.26
NUP54-207ENST00000508583 RHOVQ96L33 236 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 OR2A7Q96R45 310 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 OR4F4Q96R69 305 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 SPIN2AQ99865 258 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 SPIN2BQ9BPZ2 258 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 HSPB9Q9BQS6 159 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 HRASLSQ9HDD0 168 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 ZFP57Q9NU63 452 aa7.21□□□□□ -1.26
NUP54-207ENST00000508583 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 SRRM4A7MD48 611 aaKnown RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 H0Y980 276 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 ATP6V0E1O15342 81 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 RAMP3O60896 148 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 KBTBD11O94819 623 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 IGHG4P01861 327 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 CRYGBP07316 175 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 GNB1P62873 340 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 RPL8P62917 257 aaKnown RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 KLF9Q13886 244 aaPredicted RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 POU2AF1Q16633 256 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 PRSS8Q16651 343 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 TBC1D26Q86UD7 250 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms