RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 C17orf105B2RV13 164 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 P2RY10O00398 339 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 PTGESO14684 152 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 B4GALT2O60909 372 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RHBDL1O75783 438 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 NUDT14O95848 222 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 HAND1O96004 215 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 CRYAAP02489 173 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 GYPBP06028 91 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 GPX1P07203 203 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LINC00869P0C866 280 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 IGLC1P0CG04 106 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF728P0DKX0 622 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 GNB3P16520 340 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 FUT1P19526 365 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 IL3RAP26951 378 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LGALS7P47929 136 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 TCL1AP56279 114 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 PLP1P60201 277 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 KRTDAPP60985 99 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RPL23P62829 140 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 GNB2P62879 340 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 MRPS6P82932 125 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 HIST1H1AQ02539 215 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 SLAQ13239 276 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 OR8B8Q15620 311 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM249Q2WGJ8 235 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 WDR38Q5JTN6 314 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 MRPL2Q5T653 305 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 C1orf140Q5VVS0 124 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RFLNAQ6ZTI6 216 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 MRPL21Q7Z2W9 205 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 CMTM8Q8IZV2 173 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LRRC25Q8N386 305 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF843Q8N446 348 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 SCCPDHQ8NBX0 429 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 STXBP6Q8NFX7 210 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 OR10G8Q8NGN5 311 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 PFN4Q8NHR9 129 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 SGMS2Q8NHU3 365 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 CLDN23Q96B33 292 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RNF183Q96D59 192 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LINC00615Q96LM1 132 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RAB40CQ96S21 281 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 KLHDC3Q9BQ90 382 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 WFDC6Q9BQY6 131 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 RSG1Q9BU20 258 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM59Q9BXS4 323 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 GNB1LQ9BYB4 327 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 ULBP2Q9BZM5 246 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 PARP12Q9H0J9 701 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LINC00597Q9H2U6 94 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 MS4A6AQ9H2W1 248 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 METTL7AQ9H8H3 244 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF286AQ9HBT8 521 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 NECAP2Q9NVZ3 263 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 PLEKHJ1Q9NW61 149 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 MRPL16Q9NX20 251 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 MCTS1Q9ULC4 181 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LY96Q9Y6Y9 160 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 R4GMQ9 66 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 LAMA1P25391 3075 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 COL12A1Q99715 3063 aa3.8□□□□□ -1.8
PDLIM5-211ENST00000508531 CACNA1EQ15878 2313 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ABCA12Q86UK0 2595 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 DOCK6Q96HP0 2047 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 TRAV38-1A0A0B4J264 116 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 A0A0G2JMM0 328 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 CTXND1A0A1B0GTU2 59 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 LOC102725191A0A1B0GVB3 256 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 A0A1B0GWA3 101 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 A0A1W2PPB8 328 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 MBLAC1A4D2B0 266 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM189A5PLL7 270 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 LIPT2A6NK58 231 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 KIR3DP1A8MWS1 328 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF878C9JN71 531 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 KLRC4-KLRK1H3BQV0 150 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 SAP18O00422 153 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF737O75373 536 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 GJB3O75712 270 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 RAD51DO75771 328 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 B3GAT3O94766 335 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 LYPD3O95274 346 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 CLDN14O95500 239 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 TNFP01375 233 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 HLA-DQA1P01909 254 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 HBZP02008 142 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 GYPAP02724 150 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 CFC1P0CG37 223 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 PMCHP20382 165 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 KITLGP21583 273 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 HIST1H1TP22492 207 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 NPY1RP25929 384 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 GDF1P27539 372 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms