RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 S1PR3Q99500 378 aa9.99□□□□□ -0.81
LIN54-206ENST00000506560 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
LIN54-206ENST00000506560 TREM1Q9NP99 234 aa9.99□□□□□ -0.81
LIN54-206ENST00000506560 SPG11Q96JI7 2443 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 FLI1Q01543 452 aaPredicted RBP9.98□□□□□ -0.81
LIN54-206ENST00000506560 SVBPQ8N300 66 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 ZNF714Q96N38 554 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 LINC00574Q9H8X3 128 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 PARP11Q9NR21 331 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 UTP20O75691 2785 aaKnown RBP9.98□□□□□ -0.81
LIN54-206ENST00000506560 NDUFB3O43676 98 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 HPRT1P00492 218 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 CT45A6P0DMU7 189 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 CT45A5P0DMU8 189 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 CT45A7P0DMV0 189 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 HFEQ30201 348 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 SLC25A48Q6ZT89 311 aaKnown RBP9.98□□□□□ -0.81
LIN54-206ENST00000506560 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
LIN54-206ENST00000506560 MAP1AP78559 2803 aaPredicted RBP9.98□□□□□ -0.81
LIN54-206ENST00000506560 SRRM4A7MD48 611 aaKnown RBP9.97□□□□□ -0.81
LIN54-206ENST00000506560 H7C2Y5 167 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 C19orf84I3L1E1 186 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 NPBWR1P48145 328 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 TMEM14EPQ6UXP3 125 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 LYPD6BQ8NI32 183 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 TMEM204Q9BSN7 226 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 TMEM140Q9NV12 185 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 UBE2L5PA0A1B0GUS4 154 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 PMS2P5A8MQ11 134 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 RAB7AP51149 207 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 F2RL1P55085 397 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 LRRC10Q5BKY1 277 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 CRYBG3Q68DQ2 2970 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 OPN1MWP04001 364 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 OPN1MW2P0DN77 364 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 OPN1MW3P0DN78 364 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 RPL35P42766 123 aaKnown RBP9.97□□□□□ -0.81
LIN54-206ENST00000506560 AKR1D1P51857 326 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 RELBQ01201 579 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 LILRB2Q8N423 598 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 C11orf42Q8N5U0 333 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 MRPL20Q9BYC9 149 aaKnown RBP9.97□□□□□ -0.81
LIN54-206ENST00000506560 UQCC1Q9NVA1 299 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 MLXQ9UH92 298 aa9.97□□□□□ -0.81
LIN54-206ENST00000506560 FAM90A26D6RGX4 464 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 NDUFS7O75251 213 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 IFNA17P01571 189 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 DLX6P56179 175 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 SLC38A11Q08AI6 406 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 SLC25A24Q6NUK1 477 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 HEPN1Q6WQI6 88 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 IL34Q6ZMJ4 242 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 SSX7Q7RTT5 188 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 RHOVQ96L33 236 aa9.96□□□□□ -0.81
LIN54-206ENST00000506560 MYO18BQ8IUG5 2567 aa9.96□□□□□ -0.82
LIN54-206ENST00000506560 RNASEK-C17orf49H0YIS7 233 aa9.96□□□□□ -0.82
LIN54-206ENST00000506560 TSPAN15O95858 294 aa9.96□□□□□ -0.82
LIN54-206ENST00000506560 TCTEX1D1Q8N7M0 179 aa9.96□□□□□ -0.82
LIN54-206ENST00000506560 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.82
LIN54-206ENST00000506560 FAM157AC9JC47 383 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 ITGB1BP1O14713 200 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 DEFA4P12838 97 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 NQO2P16083 231 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 SNCAP37840 140 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 TAS2R30P59541 319 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 OR4A47Q6IF82 309 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 SPSB3Q6PJ21 355 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 ITLN2Q8WWU7 325 aaPredicted RBP9.95□□□□□ -0.82
LIN54-206ENST00000506560 RARRES2Q99969 163 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 GAL3ST2Q9H3Q3 398 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 EPG5Q9HCE0 2579 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 ABCA1O95477 2261 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 PIGBOS1A0A0B4J2F0 54 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 C15orf62A8K5M9 175 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 MEF2CQ06413 473 aaPredicted RBP9.95□□□□□ -0.82
LIN54-206ENST00000506560 C10orf91Q5T1B1 145 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 ZNF841Q6ZN19 808 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 ABHD12Q8N2K0 398 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 TMEM170AQ8WVE7 144 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 IGFBPL1Q8WX77 278 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 KAAG1Q9UBP8 84 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 LAMP3Q9UQV4 416 aa9.95□□□□□ -0.82
LIN54-206ENST00000506560 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
LIN54-206ENST00000506560 RRHO14718 337 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 CD5P06127 495 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 ELLP55199 621 aaPredicted RBP9.94□□□□□ -0.82
LIN54-206ENST00000506560 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 OR4A16Q8NH70 328 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 OR4S2Q8NH73 311 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 KLF2Q9Y5W3 355 aaPredicted RBP9.94□□□□□ -0.82
LIN54-206ENST00000506560 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.82
LIN54-206ENST00000506560 IFNA5P01569 189 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 IGHV2-70P01814 119 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 SFTA3P0C7M3 94 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 CDKN1AP38936 164 aa9.94□□□□□ -0.82
LIN54-206ENST00000506560 DHRS7BQ6IAN0 325 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms