RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 MAS1LP35410 378 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 DEFA5Q01523 94 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 C15orf32Q32M92 178 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 ZNF645Q8N7E2 425 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 TRBV9A0A0B4J1U6 114 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 TMEM272A0A1B0GTI8 110 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 CYB5BO43169 146 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 SCGNO76038 276 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 HIST1H1BP16401 226 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 HIST1H1DP16402 221 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 MECP2P51608 486 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 HES5Q5TA89 166 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 IDO2Q6ZQW0 420 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 Q6ZS49 121 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 OR4S2Q8NH73 311 aa15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 ZNF430Q9H8G1 570 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-210ENST00000506042 IZUMO1RA6ND01 250 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 SRRM4A7MD48 611 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 FCGR3BO75015 233 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 SAA1P0DJI8 122 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 FOLR2P14207 255 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 DTYMKP23919 212 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 KIR2DS2P43631 304 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 RPS25P62851 125 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 DEFB114Q30KQ6 69 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 LINC00322Q6ZN03 302 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 TMEM91Q6ZNR0 172 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 H1FOOQ8IZA3 346 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 OR52B4Q8NGK2 314 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 DDB2Q92466 427 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 HSD17B10Q99714 261 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 FAM110AQ9BQ89 295 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 OR51E2Q9H255 320 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 ZC4H2Q9NQZ6 224 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 ADAM30Q9UKF2 790 aa15.91■□□□□ 0.14
SQSTM1-210ENST00000506042 C2orf70A6NJV1 201 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 HRASP01112 189 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 DEFA4P12838 97 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 GNB3P16520 340 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 ZNF57Q68EA5 555 aaPredicted RBP15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 GPHB5Q86YW7 130 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 DEFB125Q8N687 156 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 EEF1AKMT3Q96AZ1 226 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 MGLLQ99685 303 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 RETNQ9HD89 108 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 FBXL7Q9UJT9 491 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 BLOC1S6Q9UL45 172 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 TNCP24821 2201 aa15.9■□□□□ 0.14
SQSTM1-210ENST00000506042 MFNGO00587 321 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 OR2J3O76001 311 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 NDUFB8O95169 186 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 ARL3P36405 182 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 RPL27AP46776 148 aaKnown RBP15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 IRF3Q14653 427 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 MARC2Q969Z3 335 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 CXorf58Q96LI9 332 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 OR2A7Q96R45 310 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 GFI1Q99684 422 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 GGTLC1Q9BX51 225 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 OR2W1Q9Y3N9 320 aa15.89■□□□□ 0.13
SQSTM1-210ENST00000506042 TRAV1-2A0A0B4J238 106 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 ZNF320A2RRD8 509 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 NPIPB5A8MRT5 1133 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 PRH1P02810 166 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 CD7P09564 240 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 SLC38A6Q8IZM9 456 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 ATG5Q9H1Y0 275 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 DCSTAMPQ9H295 470 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 THYN1Q9P016 225 aa15.88■□□□□ 0.13
SQSTM1-210ENST00000506042 LOC102724200A0A096LPH7 203 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 TRBV7-1A0A0A6YYK4 115 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 IFITM5A6NNB3 132 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 LINC00473A8K010 186 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 ZNF785A8K8V0 405 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 KBTBD11O94819 623 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 SNRPBP14678 240 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 RAB3BP20337 219 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 CBLN1P23435 193 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 FABP5Q01469 135 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 RBPMS2Q6ZRY4 209 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 PRSS48Q7RTY5 328 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 TCTEX1D2Q8WW35 142 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 MAFIPQ8WZ33 124 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 FYTTD1Q96QD9 318 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 KCNK7Q9Y2U2 307 aa15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 HUWE1Q7Z6Z7 4374 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-210ENST00000506042 TRAV25A0A0B4J276 109 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 NUPR2A6NF83 97 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 OR2C1O95371 312 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 APOC4P55056 127 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 ZNF45Q02386 682 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 VCX3BQ9H321 246 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 DUSP21Q9H596 190 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 SLC2A9Q9NRM0 540 aa15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 RBMX2Q9Y388 322 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-210ENST00000506042 RBMY1BA6NDE4 496 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-210ENST00000506042 RBMY1EA6NEQ0 496 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-210ENST00000506042 PPP5D1E7EU14 171 aa15.85■□□□□ 0.13
SQSTM1-210ENST00000506042 RAB27BO00194 218 aa15.85■□□□□ 0.13
SQSTM1-210ENST00000506042 RBMY1DP0C7P1 496 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms