RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 GAPDHP04406 335 aaKnown RBP7.56□□□□□ -1.2
TPM3-218ENST00000505010 RRASP10301 218 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 CEACAM3P40198 252 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 NKX2-5P52952 324 aaPredicted RBP7.56□□□□□ -1.2
TPM3-218ENST00000505010 LGALS4P56470 323 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 ERVK-16P61578 105 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 CYCSP99999 105 aaKnown RBP7.56□□□□□ -1.2
TPM3-218ENST00000505010 PAX8Q06710 450 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 Q5BKY6 102 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 TPTE2P1Q5T6R2 138 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 DHRS7BQ6IAN0 325 aaPredicted RBP7.56□□□□□ -1.2
TPM3-218ENST00000505010 MOB3BQ86TA1 216 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 NOXA1Q86UR1 476 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 FOXRED2Q8IWF2 684 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 DMBX1Q8NFW5 382 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 OR1S1Q8NH92 325 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 PPP1R1CQ8WVI7 109 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 LSM10Q969L4 123 aaKnown RBP7.56□□□□□ -1.2
TPM3-218ENST00000505010 GPR146Q96CH1 333 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 RBMXL1Q96E39 390 aaKnown RBP7.56□□□□□ -1.2
TPM3-218ENST00000505010 C1orf159Q96HA4 380 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 PLEKHA2Q9HB19 425 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 HIF1ANQ9NWT6 349 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 CACNG5Q9UF02 275 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 WASHC3Q9Y3C0 194 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 AUP1Q9Y679 476 aa7.56□□□□□ -1.2
TPM3-218ENST00000505010 IGHV3OR16-10A0A075B7F0 116 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 FXYD6-FXYD2A0A087WZ82 144 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 TRAV14DV4A0A0A6YYC5 116 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 TRAV40A0A0B4J280 105 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 IGHV1-3A0A0C4DH29 117 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 LY6LH3BQJ8 138 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 NXPH3O95157 252 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 NQO2P16083 231 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 SRD5A1P18405 259 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 RAB13P51153 203 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 UBE2E1P51965 193 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 TAGLNQ01995 201 aaKnown RBP7.55□□□□□ -1.2
TPM3-218ENST00000505010 FGL1Q08830 312 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 SMCO1Q147U7 214 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 IZUMO4Q1ZYL8 232 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 TMEM249Q2WGJ8 235 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 LDLRAD2Q5SZI1 272 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 SSX9Q7RTT3 188 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 H2BFWTQ7Z2G1 175 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 LHFPL4Q7Z7J7 247 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 PDPNQ86YL7 162 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 GRPEL2Q8TAA5 225 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 HYLS1Q96M11 299 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 C7orf69Q9H7B7 122 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 DPM3Q9P2X0 92 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 LSM5Q9Y4Y9 91 aaKnown RBP7.55□□□□□ -1.2
TPM3-218ENST00000505010 HILPDAQ9Y5L2 63 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 MMP24Q9Y5R2 645 aa7.55□□□□□ -1.2
TPM3-218ENST00000505010 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 A0A1B0GU03 582 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 A0A1W2PPI3 338 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 TIMM23O14925 209 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 NPFFO15130 113 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 SHOXO15266 292 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 MPC2O95563 127 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 HRASP01112 189 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 TGFAP01135 160 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 IGKV1-16P04430 117 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 PET100P0DJ07 73 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 IGHV4-31P0DP07 118 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 GATA3P23771 443 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 PSMB6P28072 239 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 MC5RP33032 325 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 SAA4P35542 130 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 NKX2-1P43699 371 aaPredicted RBP7.54□□□□□ -1.2
TPM3-218ENST00000505010 GZMKP49863 264 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 RAB32Q13637 225 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 MINOS1Q5TGZ0 78 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 RUSC1-AS1Q66K80 236 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 VKORC1L1Q8N0U8 176 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 THAP6Q8TBB0 222 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 TMEM140Q9NV12 185 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 MBD2Q9UBB5 411 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 TBL2Q9Y4P3 447 aaKnown RBP7.54□□□□□ -1.2
TPM3-218ENST00000505010 MINOS1-NBL1R4GNA1 71 aa7.54□□□□□ -1.2
TPM3-218ENST00000505010 TET2Q6N021 2002 aaPredicted RBP7.54□□□□□ -1.2
TPM3-218ENST00000505010 IGHV1-69DA0A0B4J2H0 117 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 J3QLI3 93 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 K7EPK0 472 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 WRBO00258 174 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 ARPC5O15511 151 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 SSSCA1O60232 199 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 RBMXL2O75526 392 aaKnown RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 IGHV1-69P01742 117 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
TPM3-218ENST00000505010 P0C879 139 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 SLC25A6P12236 298 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 PAX6P26367 422 aa7.53□□□□□ -1.2
TPM3-218ENST00000505010 OR2B8PP59922 312 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms