RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ECI1P42126 302 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 CBX5P45973 191 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 UBE2KP61086 200 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 FHL3Q13643 280 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 CDK10Q15131 360 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 RNASE12Q5GAN4 147 aaKnown RBP11.04□□□□□ -0.64
HOXC9-202ENST00000504557 C9orf66Q5T8R8 295 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 GPR107Q5VW38 600 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 PYHIN1Q6K0P9 492 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 SSX9Q7RTT3 188 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 OSR1Q8TAX0 266 aaPredicted RBP11.04□□□□□ -0.64
HOXC9-202ENST00000504557 HSD17B10Q99714 261 aaKnown RBP11.04□□□□□ -0.64
HOXC9-202ENST00000504557 DNAH3Q8TD57 4116 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 SORL1Q92673 2214 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 C13orf42A0A1B0GVH6 325 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 LINC01619G3V211 115 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 ACTL6BO94805 426 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 LY86O95711 162 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 RFX2P48378 723 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 HERV-K104P61576 105 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 DGCR2P98153 550 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 EGFEM1PQ0D2K5 195 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 PRSS8Q16651 343 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 C10orf55Q5SWW7 151 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 SNX29P2Q8IUI4 249 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 MFSD4AQ8N468 514 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 POC5Q8NA72 575 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 OR5AP2Q8NGF4 316 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 OR4S2Q8NH73 311 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 SRSF12Q8WXF0 261 aaKnown RBP11.03□□□□□ -0.64
HOXC9-202ENST00000504557 PRR25Q96S07 402 aa11.03□□□□□ -0.64
HOXC9-202ENST00000504557 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
HOXC9-202ENST00000504557 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 FAM25AB3EWG3 89 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 FAM25CB3EWG5 89 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 FAM25GB3EWG6 89 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 SULT1C2O00338 296 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 OVOL1O14753 267 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 HPGDSO60760 199 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 TMEM127O75204 238 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 PRH1P02810 166 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 PRSS3P35030 304 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 RUNX1Q01196 453 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 OR5H2Q8NGV7 314 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 OR51H1Q8NH63 302 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
HOXC9-202ENST00000504557 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.65
HOXC9-202ENST00000504557 SAP30O75446 220 aa11.01□□□□□ -0.65
HOXC9-202ENST00000504557 RPA2P15927 270 aa11.01□□□□□ -0.65
HOXC9-202ENST00000504557 HLA-DMAP28067 261 aa11.01□□□□□ -0.65
HOXC9-202ENST00000504557 RORCP51449 518 aa11.01□□□□□ -0.65
HOXC9-202ENST00000504557 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
HOXC9-202ENST00000504557 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
HOXC9-202ENST00000504557 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
HOXC9-202ENST00000504557 FYTTD1Q96QD9 318 aaKnown RBP11.01□□□□□ -0.65
HOXC9-202ENST00000504557 ZNF2Q9BSG1 426 aaPredicted RBP11.01□□□□□ -0.65
HOXC9-202ENST00000504557 MRPS26Q9BYN8 205 aaKnown RBP11.01□□□□□ -0.65
HOXC9-202ENST00000504557 HMX3A6NHT5 357 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 CREBL2O60519 120 aaPredicted RBP11□□□□□ -0.65
HOXC9-202ENST00000504557 RAMP3O60896 148 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 HSPB1P04792 205 aaKnown RBP11□□□□□ -0.65
HOXC9-202ENST00000504557 ELK1P19419 428 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 EIF4EBP1Q13541 118 aaPredicted RBP11□□□□□ -0.65
HOXC9-202ENST00000504557 AADACL3Q5VUY0 350 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 GPR141Q7Z602 305 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 ANKRD13BQ86YJ7 626 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 MMD2Q8IY49 270 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 SPAG16Q8N0X2 631 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 RHOVQ96L33 236 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 SCOCQ9UIL1 159 aa11□□□□□ -0.65
HOXC9-202ENST00000504557 KBTBD11O94819 623 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 OR2A4O95047 310 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 APOA1P02647 267 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 OR9G9P0C7N8 305 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 MYOD1P15172 320 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 HRH1P35367 487 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 KIR2DS2P43631 304 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 BRWD1-AS2P59051 145 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 TAS2R46P59540 309 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 CATR1Q13166 79 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 CTF1Q16619 201 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 MZT2AQ6P582 158 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 C19orf35Q6ZS72 473 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 HAPLN4Q86UW8 402 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 GIMAP1Q8WWP7 306 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 OR2A7Q96R45 310 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 RSRP1Q9BUV0 290 aa10.99□□□□□ -0.65
HOXC9-202ENST00000504557 TINAGL1Q9GZM7 467 aaPredicted RBP10.99□□□□□ -0.65
HOXC9-202ENST00000504557 A0A0G2JLM5 398 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 DPPA5A6NC42 116 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 H3BUA1 57 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 GABARAPO95166 117 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 HRASP01112 189 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 RLN1P04808 185 aa10.98□□□□□ -0.65
HOXC9-202ENST00000504557 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
HOXC9-202ENST00000504557 TSPAN5P62079 268 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms