RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 TSNAXQ99598 290 aaKnown RBP9.76□□□□□ -0.85
PDGFRA-204ENST00000504461 SRRQ9GZT4 340 aa9.76□□□□□ -0.85
PDGFRA-204ENST00000504461 PLSCR3Q9NRY6 295 aa9.76□□□□□ -0.85
PDGFRA-204ENST00000504461 PRKDCP78527 4128 aaKnown RBP9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 IGKV1D-13A0A0B4J2D9 117 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 NAP1L6A6NFF2 107 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 K7EIL1 84 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 GPR31O00270 319 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 B3GALNT1O75752 331 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 IGLV2-14P01704 120 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 IGKV1-13P0DP09 117 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 CD40LGP29965 261 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 PPP5CP53041 499 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 F2RL1P55085 397 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 RAB25P57735 213 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 FXYD4P59646 89 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 KRTAP10-11P60412 298 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 CATR1Q13166 79 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 RNASE12Q5GAN4 147 aaKnown RBP9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 TRIQKQ629K1 86 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 MFSD4AQ8N468 514 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 ZNF383Q8NA42 475 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 NPBQ8NG41 125 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 CCDC32Q9BV29 185 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 TINAGL1Q9GZM7 467 aaPredicted RBP9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 FAM212BQ9NTI7 297 aaPredicted RBP9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 SLC2A8Q9NY64 477 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 KIAA1456Q9P272 454 aa9.75□□□□□ -0.85
PDGFRA-204ENST00000504461 J3QRK9 145 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 M0QYG6 137 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 CCL24O00175 119 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 RBFOX2O43251 390 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 SPDEFO95238 335 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 FOXE3Q13461 319 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 MMDQ15546 238 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 LHFPL1Q86WI0 220 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 FAM71E2Q8N5Q1 922 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 DRAXINQ8NBI3 349 aaPredicted RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 OSR1Q8TAX0 266 aaPredicted RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 DUX3Q96PT4 197 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 SLC25A21Q9BQT8 299 aaPredicted RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 C7orf50Q9BRJ6 194 aaKnown RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 WDR12Q9GZL7 423 aaKnown RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 CCL28Q9NRJ3 127 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 SLC35D1Q9NTN3 355 aa9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 ZMAT5Q9UDW3 170 aaKnown RBP9.74□□□□□ -0.85
PDGFRA-204ENST00000504461 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 WI2-2373I1.2A0A1W2PRP0 233 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 PGLYRP1O75594 196 aaPredicted RBP9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 ELANEP08246 267 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 CDX1P47902 265 aaPredicted RBP9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 RPS16P62249 146 aaKnown RBP9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 EGFEM1PQ0D2K5 195 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 KLF9Q13886 244 aaPredicted RBP9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 ZNF846Q147U1 533 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 SCGB2B2Q4G0G5 96 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 AADACL3Q5VUY0 350 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 ZNF57Q68EA5 555 aaPredicted RBP9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 LCNL1Q6ZST4 164 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 KCTD9Q7L273 389 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 OR4S2Q8NH73 311 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 DDB2Q92466 427 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 TRIM63Q969Q1 353 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 RBMXL1Q96E39 390 aaKnown RBP9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 RAX2Q96IS3 184 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 P2RX4Q99571 388 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 MCUBQ9NWR8 336 aa9.73□□□□□ -0.85
PDGFRA-204ENST00000504461 NBR2O15453 112 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 CREBL2O60519 120 aaPredicted RBP9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 HRASP01112 189 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 ZNF735P0CB33 412 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 RND3P61587 244 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 EIF4EBP1Q13541 118 aaPredicted RBP9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 LIN54Q6MZP7 749 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 TMEM65Q6PI78 240 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 IDO2Q6ZQW0 420 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 ZNF818PQ6ZRF7 136 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 CADM3Q8N126 398 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 CCDC71LQ8N9Z2 235 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 OR4C16Q8NGL9 310 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 VSTM2AQ8TAG5 236 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 TCTEX1D2Q8WW35 142 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 HRASLSQ9HDD0 168 aa9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 C14orf166Q9Y224 244 aaKnown RBP9.72□□□□□ -0.85
PDGFRA-204ENST00000504461 SHOXO15266 292 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 MPPED1O15442 326 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 FCGR3BO75015 233 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 ATG12O94817 140 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 HPRT1P00492 218 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 IGHG4P01861 327 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 IGKV1-16P04430 117 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 IGF1P05019 195 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 CTSDP07339 412 aaPredicted RBP9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 PGAM2P15259 253 aa9.71□□□□□ -0.86
PDGFRA-204ENST00000504461 F2RP25116 425 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms