RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 IGHV4-59P01825 116 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 LY6EQ16553 131 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM268Q5VZI3 342 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 UXS1Q8NBZ7 420 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 RNASE11Q8TAA1 199 aaKnown RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 RBPMSQ93062 196 aaKnown RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 RITA1Q96K30 269 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 OR51J1Q9H342 316 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 PRR13Q9NZ81 148 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 SHPKQ9UHJ6 478 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 TCF19Q9Y242 345 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 ANK3Q12955 4377 aaKnown RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 TEP1Q99973 2627 aaKnown RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 A6NDX4 124 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 NCBP2LA6PVI3 153 aaKnown RBP11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 IGKV1-39P01597 117 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 IGKV1D-39P04432 117 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 MMDQ15546 238 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 LIN54Q6MZP7 749 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 Q6ZNX1 250 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 TMEM86BQ8N661 226 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 Q8N6K4 173 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 DMBX1Q8NFW5 382 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 LHFPL5Q8TAF8 219 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 RRNAD1Q96FB5 475 aaKnown RBP11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 RHOVQ96L33 236 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 ALG5Q9Y673 324 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
CYSTM1-202ENST00000504227 A0A0B4J293 547 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 DUXBA0A1W2PPF3 345 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 C7orf66A4D0T2 115 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 MARCH11A6NNE9 402 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 SRRM4A7MD48 611 aaKnown RBP11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 NBR2O15453 112 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 SSNA1O43805 119 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 OR2F2O95006 317 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 IFNA21P01568 189 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 G6PCP35575 357 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 AKR1C2P52895 323 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 PSG5Q15238 335 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 H2BFWTQ7Z2G1 175 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 LYZL2Q7Z4W2 148 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 VKORC1L1Q8N0U8 176 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 NPBQ8NG41 125 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 VSTM2AQ8TAG5 236 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 SEC22AQ96IW7 307 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 RBM14Q96PK6 669 aaKnown RBP11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 SLC25A33Q9BSK2 321 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
CYSTM1-202ENST00000504227 RRHO14718 337 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 SLC25A17O43808 307 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 OR2A4O95047 310 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 SPDEFO95238 335 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 HOXB5P09067 269 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 VDAC1P21796 283 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 CNTFRP26992 372 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 F2RL1P55085 397 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 UBE2KP61086 200 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 PLGLAQ15195 96 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 POU2AF1Q16633 256 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 FBLN7Q53RD9 439 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 OR4A47Q6IF82 309 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 C16orf82Q7Z2V1 217 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 FAM219AQ8IW50 185 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 CADM3Q8N126 398 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 SLC35G3Q8N808 338 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 TEX45Q8NA69 505 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 LSM10Q969L4 123 aaKnown RBP11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 OR2A7Q96R45 310 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 JMJD8Q96S16 334 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 PLSCR3Q9NRY6 295 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 METTL1Q9UBP6 276 aaKnown RBP11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 TMED3Q9Y3Q3 217 aa11.06□□□□□ -0.64
CYSTM1-202ENST00000504227 M0QZK8 103 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 SNAPC5O75971 98 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 NDUFA3O95167 84 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 IGKV1-5P01602 117 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 OR4A5Q8NH83 315 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 RASL11BQ9BPW5 248 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 MED28Q9H204 178 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 FBXL15Q9H469 300 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 RAB18Q9NP72 206 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 BET1LQ9NYM9 111 aa11.05□□□□□ -0.64
CYSTM1-202ENST00000504227 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms