RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 NPBQ8NG41 125 aa7.97□□□□□ -1.13
NUP54-203ENST00000504173 OSR1Q8TAX0 266 aaPredicted RBP7.97□□□□□ -1.13
NUP54-203ENST00000504173 TAF15Q92804 592 aaKnown RBP eCLIP7.97□□□□□ -1.13
NUP54-203ENST00000504173 RASL11BQ9BPW5 248 aa7.97□□□□□ -1.13
NUP54-203ENST00000504173 RTBDNQ9BSG5 229 aaPredicted RBP7.97□□□□□ -1.13
NUP54-203ENST00000504173 RANBP3Q9H6Z4 567 aaPredicted RBP7.97□□□□□ -1.13
NUP54-203ENST00000504173 PLSCR3Q9NRY6 295 aa7.97□□□□□ -1.13
NUP54-203ENST00000504173 METTL1Q9UBP6 276 aaKnown RBP7.97□□□□□ -1.13
NUP54-203ENST00000504173 TBC1D24Q9ULP9 559 aa7.97□□□□□ -1.13
NUP54-203ENST00000504173 SH2D7A6NKC9 451 aaPredicted RBP7.96□□□□□ -1.14
NUP54-203ENST00000504173 SLC25A17O43808 307 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 RAMP3O60896 148 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 S1PR2O95136 353 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 NDUFB6O95139 128 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 NDUFA3O95167 84 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 NDUFA7O95182 113 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 HPRT1P00492 218 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 HRASP01112 189 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 AMY1AP04745 511 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 HKR1P10072 659 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 LPAR6P43657 344 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 LGALS7P47929 136 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 RAG2P55895 527 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 BRWD1-AS2P59051 145 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 BLCAPP62952 87 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 RELBQ01201 579 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 IFITM3Q01628 133 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 ASAH1Q13510 395 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 PSG5Q15238 335 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 C5orf64Q2M2E5 130 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 VMA21Q3ZAQ7 101 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 ARSJQ5FYB0 599 aaPredicted RBP7.96□□□□□ -1.14
NUP54-203ENST00000504173 C11orf88Q6PI97 169 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 Q6ZSV7 163 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 FAM71E2Q8N5Q1 922 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 TCTEX1D1Q8N7M0 179 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 ADAD2Q8NCV1 583 aaKnown RBP7.96□□□□□ -1.14
NUP54-203ENST00000504173 OR4F5Q8NH21 305 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 PRSS22Q9GZN4 317 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 FBXL15Q9H469 300 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 NAA60Q9H7X0 242 aa7.96□□□□□ -1.14
NUP54-203ENST00000504173 C3orf85A0A1B0GTC6 90 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 FAM240BA0A1B0GVZ2 78 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 CRYM-AS1A6NIL9 109 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 SRRM4A7MD48 611 aaKnown RBP7.95□□□□□ -1.14
NUP54-203ENST00000504173 H0Y980 276 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 TSPAN9O75954 239 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 IGLV2-23P01705 113 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 SERPINE2P07093 398 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 SAA1P0DJI8 122 aaPredicted RBP7.95□□□□□ -1.14
NUP54-203ENST00000504173 VSIG10L2P0DP72 767 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 NQO2P16083 231 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 AKR1C4P17516 323 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 TAS2R31P59538 309 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 DEFA1P59665 94 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 DEFA3P59666 94 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 Q6ZS46 218 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 SSX9Q7RTT3 188 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 SGPP2Q8IWX5 399 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 CENPSQ8N2Z9 138 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 OR2T6Q8NHC8 308 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 AIFM2Q9BRQ8 373 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 ZNF702PQ9H963 129 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 PLEKHA2Q9HB19 425 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 FAM212BQ9NTI7 297 aaPredicted RBP7.95□□□□□ -1.14
NUP54-203ENST00000504173 COMMD9Q9P000 198 aa7.95□□□□□ -1.14
NUP54-203ENST00000504173 B3GALNT1O75752 331 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 HLA-DRB1P01911 266 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 OR5AC1P0C628 307 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 SLC6A1P30531 599 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 VDAC2P45880 294 aaPredicted RBP7.94□□□□□ -1.14
NUP54-203ENST00000504173 UBE2KP61086 200 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 ERVK-16P61578 105 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 TRIM16LQ309B1 348 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 SP6Q3SY56 376 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 ZNF585BQ52M93 769 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 LIN54Q6MZP7 749 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 SLC35E3Q7Z769 313 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 VKORC1L1Q8N0U8 176 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 TEX45Q8NA69 505 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 DMBX1Q8NFW5 382 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 VSTM2AQ8TAG5 236 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 ENKURQ8TC29 256 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 TMEM230Q96A57 120 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 R3HDM4Q96D70 268 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 RHOVQ96L33 236 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 TP53RKQ96S44 253 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 CLCC1Q96S66 551 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 C20orf85Q9H1P6 137 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 C16orf95Q9H693 158 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 FLVCR2Q9UPI3 526 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 KCNIP3Q9Y2W7 256 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 SIGLEC9Q9Y336 463 aa7.94□□□□□ -1.14
NUP54-203ENST00000504173 ARPC1BO15143 372 aaKnown RBP7.93□□□□□ -1.14
NUP54-203ENST00000504173 CREBL2O60519 120 aaPredicted RBP7.93□□□□□ -1.14
NUP54-203ENST00000504173 OR2A4O95047 310 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 CA2P00918 260 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 TCRBP04435 133 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 CRYGBP07316 175 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms