RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CDK5R1Q15078 307 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 ELOCQ15369 112 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 DEFB106AQ8N104 65 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 OR2I1PQ8NGU4 316 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 DLX4Q92988 240 aaPredicted RBP5.34□□□□□ -1.56
CLCN3-204ENST00000504131 NABP1Q96AH0 204 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 AQP10Q96PS8 301 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 PBOV1Q9GZY1 135 aa5.34□□□□□ -1.56
CLCN3-204ENST00000504131 RBM22Q9NW64 420 aaKnown RBP eCLIP5.34□□□□□ -1.56
CLCN3-204ENST00000504131 KLF13Q9Y2Y9 288 aaPredicted RBP5.34□□□□□ -1.56
CLCN3-204ENST00000504131 H3BS24 57 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 ZG16O60844 167 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 LY6KQ17RY6 165 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 TEX36Q5VZQ5 186 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 HIST2H2BCQ6DN03 193 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 HIST2H2BDQ6DRA6 164 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 C8orf31Q8N9H6 132 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 MBD3L2Q8NHZ7 208 aaPredicted RBP5.33□□□□□ -1.56
CLCN3-204ENST00000504131 OLIG1Q8TAK6 271 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 GSTO2Q9H4Y5 243 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 ZNF665Q9H7R5 613 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 JPT2Q9H910 190 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 B9D1Q9UPM9 204 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 SIGLEC9Q9Y336 463 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 TRAV8-6A0A0B4J262 113 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 NDUFB8O95169 186 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 CXCL8P10145 99 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 PFN2P35080 140 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 CDKN1AP38936 164 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 P2RX1P51575 399 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 FMODQ06828 376 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 UNQ9370/PRO34162Q6UXP9 181 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 ZNF740Q8NDX6 193 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 NPIPB6E9PJ23 425 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 NTN1O95631 604 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 RBP4P02753 201 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 CA7P43166 264 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 ARL16Q0P5N6 197 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 C1QL3Q5VWW1 255 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 AMN1Q8IY45 258 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 C15orf53Q8NAA6 179 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 NMES1Q9C002 83 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 FSCN3Q9NQT6 498 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 HS3ST3B1Q9Y662 390 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 ARFGEF2Q9Y6D5 1785 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 CRXO43186 299 aaPredicted RBP5.33□□□□□ -1.56
CLCN3-204ENST00000504131 PSG2P11465 335 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 WDR5P61964 334 aaKnown RBP5.33□□□□□ -1.56
CLCN3-204ENST00000504131 POU3F1Q03052 451 aaPredicted RBP5.33□□□□□ -1.56
CLCN3-204ENST00000504131 DCAF12Q5T6F0 453 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 ANKRD34AQ69YU3 496 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 SH2D6Q7Z4S9 175 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 TMEFF1Q8IYR6 380 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 IMMP2LQ96T52 175 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 TNS1Q9HBL0 1735 aaKnown RBP5.33□□□□□ -1.56
CLCN3-204ENST00000504131 SLAMF8Q9P0V8 285 aa5.33□□□□□ -1.56
CLCN3-204ENST00000504131 TRAV27A0A087WT01 109 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 H7C2G1 150 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 FGF16O43320 207 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 PYYP10082 97 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 NBL1P41271 181 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 PRDX1Q06830 199 aaKnown RBP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 KIAA1644Q3SXP7 199 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM78Q5T7P6 136 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 ACP7Q6ZNF0 438 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 OR2L13Q8N349 312 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 RABAC1Q9UI14 185 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 A0A1W2PPV9 198 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 K7ESF4 209 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 CXCL10P02778 98 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 BCL3P20749 454 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 SUB1P53999 127 aaKnown RBP eCLIP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 TDRG1Q3Y452 100 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 C10orf91Q5T1B1 145 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 DNM1P46Q6ZS02 220 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 OR4F17Q8NGA8 305 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 PRSS3P2Q8NHM4 247 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 ZNF703Q9H7S9 590 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 H0Y8X5 98 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 FAM157CP0CG43 387 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 GPX3P22352 226 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 RPS4XP62701 263 aaKnown RBP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 IL15RAQ13261 267 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 RTL8AQ9BWD3 113 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 GABARAPL1Q9H0R8 117 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 IDI2-AS1Q9NZ38 188 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 TRBV24-1A0A075B6N3 115 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 NSG1A0A0A6YYJ2 146 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 UPK2O00526 184 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 CCL22O00626 93 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 GATA3P23771 443 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 KLF9Q13886 244 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 KCTD18Q6PI47 426 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 COMMD6Q7Z4G1 85 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 OR9G1Q8NH87 305 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 IL1F10Q8WWZ1 152 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 CNRIP1Q96F85 164 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-204ENST00000504131 RARRES3Q9UL19 164 aa5.32□□□□□ -1.56
CLCN3-204ENST00000504131 LRP5O75197 1615 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms