RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TSPAN15O95858 294 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 POU2AF1Q16633 256 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 C11orf71Q6IPW1 123 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 C8orf31Q8N9H6 132 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 OR4A16Q8NH70 328 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 FAM213BQ8TBF2 198 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 TMEM231Q9H6L2 316 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 CBLN4Q9NTU7 201 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 FAM96BQ9Y3D0 163 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 CEBPZOSA8MTT3 80 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 AGPAT2O15120 278 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 OR8U8P0C7N1 319 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 ADCYAP1P18509 176 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 SNCAP37840 140 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 SPCS3P61009 180 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 SLC38A11Q08AI6 406 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 LRRC75BQ2VPJ9 315 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 C10orf91Q5T1B1 145 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 ATRAIDQ6UW56 229 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 LILRB2Q8N423 598 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 UQCC1Q9NVA1 299 aa17.46■□□□□ 0.39
UBE2D3-216ENST00000503742 PKD1L2Q7Z442 2459 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 TRBV23-1A0A0A0MS06 115 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 TRAV3A0A0B4J244 114 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 UQCRFS1P47985 274 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 SPINK9Q5DT21 86 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 ZNF841Q6ZN19 808 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 THNSL2Q86YJ6 484 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 SVBPQ8N300 66 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 LINC00311Q8N616 119 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 RAB39BQ96DA2 213 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 SCRT1Q9BWW7 348 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 TREM1Q9NP99 234 aa17.45■□□□□ 0.38
UBE2D3-216ENST00000503742 A0A087X0M5 115 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 A0A1B0GX30 115 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 RNASEK-C17orf49H0YIS7 233 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 LY86O95711 162 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 OR8G2PQ6IF36 304 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 SLC25A24Q6NUK1 477 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 ZNF429Q86V71 674 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 SCGB1C1Q8TD33 95 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 ITLN2Q8WWU7 325 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 RHOVQ96L33 236 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 RAB1BQ9H0U4 201 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 TPRP12270 2363 aaKnown RBP17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 IFNA17P01571 189 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 AGAP20933 346 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 GNLYP22749 145 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 DVL1P1P54792 670 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 FLI1Q01543 452 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 C11orf42Q8N5U0 333 aa17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 PSMG3Q9BT73 122 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 WDR61Q9GZS3 305 aaKnown RBP17.44■□□□□ 0.38
UBE2D3-216ENST00000503742 TET2Q6N021 2002 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 ATP6V1FQ16864 119 aa17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 SP5Q6BEB4 398 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 DHRS7BQ6IAN0 325 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 OR4A47Q6IF82 309 aa17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 HIPK2Q9H2X6 1198 aa17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 RALYQ9UKM9 306 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-216ENST00000503742 FAM157AC9JC47 383 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 HRASP01112 189 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 ARG1P05089 322 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 SOD3P08294 240 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 IL6RP08887 468 aaPredicted RBP17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 AKR1C8PQ5T2L2 129 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 DPPA3Q6W0C5 159 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 RSG1Q9BU20 258 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 SLC35D1Q9NTN3 355 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 CARHSP1Q9Y2V2 147 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 FBXO7Q9Y3I1 522 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 C15orf61A6NNL5 157 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 C15orf62A8K5M9 175 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 J3QR06 171 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 NUPL2O15504 423 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 H2AFB1P0C5Y9 115 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 VDAC2P45880 294 aaPredicted RBP17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 GNB2P62879 340 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 RTL8BQ17RB0 113 aa17.42■□□□□ 0.38
UBE2D3-216ENST00000503742 IGHV1-8P0DP01 117 aa17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 FAM71F2Q6NXP2 309 aa17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 SPSB3Q6PJ21 355 aa17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 DTX2Q86UW9 622 aa17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 PINX1Q96BK5 328 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 SEC11CQ9BY50 192 aa17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 MRPL20Q9BYC9 149 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 FOXA2Q9Y261 457 aaPredicted RBP17.41■□□□□ 0.38
UBE2D3-216ENST00000503742 C9JQL5 133 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 IGKV1-16P04430 117 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 LFNGQ8NES3 379 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 OR10P1Q8NGE3 313 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 OR13D1Q8NGV5 346 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 TAF15Q92804 592 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 ST6GALNAC6Q969X2 333 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 TMEM147Q9BVK8 224 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 TMEM14BQ9NUH8 114 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 TCF19Q9Y242 345 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 UBE2L5PA0A1B0GUS4 154 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 F8W036 122 aa17.4■□□□□ 0.38
UBE2D3-216ENST00000503742 GPR37O15354 613 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms