RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 VWFP04275 2813 aa13□□□□□ -0.33
SCLT1-205ENST00000503401 ATP6V0E1O15342 81 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 KCNAB3O43448 404 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 CRYGBP07316 175 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 SAA1P0DJI8 122 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-205ENST00000503401 CD28P10747 220 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 KIR2DS2P43631 304 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 PIGPP57054 158 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 CX3CL1P78423 397 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 TRIQKQ629K1 86 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 SHISA2Q6UWI4 295 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 SSX9Q7RTT3 188 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 STPG2Q8N412 459 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 PRRT1Q99946 306 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 OR51J1Q9H342 316 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 TET2Q6N021 2002 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-205ENST00000503401 LINC00854A0A1B0GVQ3 168 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 AP4M1O00189 453 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 S1PR2O95136 353 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 AP3S2P59780 193 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 UBE2KP61086 200 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 GNB1P62873 340 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 VMA21Q3ZAQ7 101 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 POC5Q8NA72 575 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 OR5AU1Q8NGC0 362 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 FAM103A1Q9BTL3 118 aaKnown RBP12.99□□□□□ -0.33
SCLT1-205ENST00000503401 WSB1Q9Y6I7 421 aa12.99□□□□□ -0.33
SCLT1-205ENST00000503401 CMYA5Q8N3K9 4069 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 PSMB11A5LHX3 300 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 RPA2P15927 270 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 F2RP25116 425 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 S100GP29377 79 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 INPP1P49441 399 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 SSBP2P81877 361 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-205ENST00000503401 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 ABHD5Q8WTS1 349 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 SLC2A8Q9NY64 477 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 SCP2D1Q9UJQ7 156 aa12.98□□□□□ -0.33
SCLT1-205ENST00000503401 PKD1L1Q8TDX9 2849 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 G3V318 75 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 MPPED1O15442 326 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCLT1-205ENST00000503401 FBXO24O75426 580 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 FAUP35544 74 aaKnown RBP12.97□□□□□ -0.33
SCLT1-205ENST00000503401 ZNF585BQ52M93 769 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 TEX45Q8NA69 505 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 ZFAND1Q8TCF1 268 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 CHPT1Q8WUD6 406 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 ZNF486Q96H40 463 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-205ENST00000503401 RHOVQ96L33 236 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 RTBDNQ9BSG5 229 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-205ENST00000503401 C5orf66Q9H5L9 145 aa12.97□□□□□ -0.33
SCLT1-205ENST00000503401 ARPC1BO15143 372 aaKnown RBP12.96□□□□□ -0.33
SCLT1-205ENST00000503401 HPRT1P00492 218 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 IGF1P05019 195 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 CTSDP07339 412 aaPredicted RBP12.96□□□□□ -0.33
SCLT1-205ENST00000503401 IL7P13232 177 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 LPAR6P43657 344 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 RND3P61587 244 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 FXYD3Q14802 87 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 ECSCRQ19T08 205 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 TCTEX1D4Q5JR98 221 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 ZNF562Q6V9R5 426 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 S100ZQ8WXG8 99 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 ZNF430Q9H8G1 570 aaPredicted RBP12.96□□□□□ -0.33
SCLT1-205ENST00000503401 COPZ2Q9P299 210 aa12.96□□□□□ -0.33
SCLT1-205ENST00000503401 CNIH1O95406 144 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 HRASP01112 189 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
SCLT1-205ENST00000503401 PRSS8Q16651 343 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 ARPC1AQ92747 370 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
SCLT1-205ENST00000503401 PLEKHA2Q9HB19 425 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 C14orf166Q9Y224 244 aaKnown RBP12.95□□□□□ -0.34
SCLT1-205ENST00000503401 VSIG4Q9Y279 399 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 WNK1Q9H4A3 2382 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 KBTBD11O94819 623 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 OR2A4O95047 310 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 VDAC1P21796 283 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 ECI1P42126 302 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 TAS2R31P59538 309 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 TNXAQ16473 311 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 OR4A47Q6IF82 309 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 PUSL1Q8N0Z8 303 aaKnown RBP12.95□□□□□ -0.34
SCLT1-205ENST00000503401 DMBX1Q8NFW5 382 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 OR2A7Q96R45 310 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 TP53RKQ96S44 253 aa12.95□□□□□ -0.34
SCLT1-205ENST00000503401 TRAV41A0A0B4J266 112 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 APELAP0DMC3 54 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 NQO2P16083 231 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 G6PCP35575 357 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 SLC35B1P78383 322 aa12.94□□□□□ -0.34
SCLT1-205ENST00000503401 CFHR3Q02985 330 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms