RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF735P0CB33 412 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 GSTT2P0CG29 244 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 GSTT2BP0CG30 244 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 C8orf88P0DMB2 117 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 HIST1H1DP16402 221 aaKnown RBP4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 DTYMKP23919 212 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 PSMB6P28072 239 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ELLP55199 621 aaPredicted RBP4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 LINC00205P59089 165 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 RHOGP84095 191 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ZNF45Q02386 682 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ATP5G2Q06055 141 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ARFRP1Q13795 201 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 RCN1Q15293 331 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ANKRD55Q3KP44 614 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 CD300EQ496F6 205 aaPredicted RBP4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 IGSF11Q5DX21 431 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 LIPKQ5VXJ0 399 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 OR4A47Q6IF82 309 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ADAMTSL5Q6ZMM2 481 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 HAPLN4Q86UW8 402 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 CADM3Q8N126 398 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 ZNF645Q8N7E2 425 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 OR10R2Q8NGX6 335 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 MARC2Q969Z3 335 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 C5orf30Q96GV9 206 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 PHB2Q99623 299 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 FAM110AQ9BQ89 295 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 SRSF8Q9BRL6 282 aaKnown RBP4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 AIFM2Q9BRQ8 373 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 OR51E2Q9H255 320 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 TP53TG1Q9Y2A0 90 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 TPRKBQ9Y3C4 175 aa4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 AK6Q9Y3D8 172 aaKnown RBP4.6□□□□□ -1.67
LSM3P4-201ENST00000502948 TMEM272A0A1B0GTI8 110 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 IZUMO1RA6ND01 250 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 RBMY1BA6NDE4 496 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 RBMY1EA6NEQ0 496 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 C2orf70A6NJV1 201 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 IFITM5A6NNB3 132 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 LINC00473A8K010 186 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 OR11H12B2RN74 326 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 PDCD5O14737 125 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 BET1O15155 118 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 ACTL6BO94805 426 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 NDUFB8O95169 186 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 CRYZL1O95825 349 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 RBMY1DP0C7P1 496 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 SAA1P0DJI8 122 aaPredicted RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 FOLR2P14207 255 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 SNRPBP14678 240 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 HIST1H1BP16401 226 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 CD36P16671 472 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 CBLN1P23435 193 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 SCAND1P57086 179 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 TNFRSF9Q07011 255 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 EIF4EBP1Q13541 118 aaPredicted RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 EXOSC2Q13868 293 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 TNXAQ16473 311 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 C15orf32Q32M92 178 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 Q6ZWC4 215 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC16A13Q7RTY0 426 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 PRSS48Q7RTY5 328 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 PUSL1Q8N0Z8 303 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 OR4A5Q8NH83 315 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 TMEM167AQ8TBQ9 72 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 FYTTD1Q96QD9 318 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 HSD17B10Q99714 261 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 GINS4Q9BRT9 223 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 KCNK15Q9H427 330 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 ZNF430Q9H8G1 570 aaPredicted RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 SLC2A9Q9NRM0 540 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 MRPS7Q9Y2R9 242 aaKnown RBP4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 PRELID3BQ9Y3B1 194 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 OR2W1Q9Y3N9 320 aa4.59□□□□□ -1.67
LSM3P4-201ENST00000502948 TRBV7-1A0A0A6YYK4 115 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 TRDV1A0A1B0GX56 115 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 NUPR2A6NF83 97 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 TEX22C9J3V5 150 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 PTGES3LE9PB15 166 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 UBE2CO00762 179 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 MPPED1O15442 326 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 RBFOX2O43251 390 aaKnown RBP eCLIP4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 RGS10O43665 173 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 MRPS14O60783 128 aaKnown RBP4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 TMEM127O75204 238 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 KBTBD11O94819 623 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 IGLV2-14P01704 120 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 IL6RP08887 468 aaPredicted RBP4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 CD7P09564 240 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 CTRB1P17538 263 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 CRHBPP24387 322 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 CALRP27797 417 aaKnown RBP4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 FABP5Q01469 135 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 TBCEQ15813 527 aaPredicted RBP4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 POU2AF1Q16633 256 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 FAM106AQ4KMX7 169 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 CTRB2Q6GPI1 263 aa4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 THOC7Q6I9Y2 204 aaKnown RBP4.58□□□□□ -1.68
LSM3P4-201ENST00000502948 CNIH2Q6PI25 160 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms