RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 KCNK7Q9Y2U2 307 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 S4R3C0 116 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 HMX3A6NHT5 357 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 DEDDO75618 318 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 FCGR3AP08637 254 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 CLDN12P56749 244 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 TNFRSF9Q07011 255 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 PLA2G7Q13093 441 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 CDK10Q15131 360 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 GPHB5Q86YW7 130 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 OSR1Q8TAX0 266 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-212ENST00000498540 FKBP14Q9NWM8 211 aa10.96□□□□□ -0.65
TRAF4-212ENST00000498540 A8MWP6 167 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 ACTL6BO94805 426 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 ARL3P36405 182 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 TPBGQ13641 420 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 RAB11BQ15907 218 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 FAM209BQ5JX69 171 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 BTNL8Q6UX41 500 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 WFDC3Q8IUB2 231 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 MMD2Q8IY49 270 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 DHRSXQ8N5I4 330 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 UXS1Q8NBZ7 420 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 BPIFB6Q8NFQ5 453 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 OR56B1Q8NGI3 324 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 ADTRPQ96IZ2 230 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 PLCXD1Q9NUJ7 323 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 FBXL7Q9UJT9 491 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
TRAF4-212ENST00000498540 AK6Q9Y3D8 172 aaKnown RBP10.95□□□□□ -0.66
TRAF4-212ENST00000498540 RBM7Q9Y580 266 aaKnown RBP10.95□□□□□ -0.66
TRAF4-212ENST00000498540 ZNF320A2RRD8 509 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 CREBL2O60519 120 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-212ENST00000498540 NDUFB8O95169 186 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 DEFB135Q30KP9 77 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 TM4SF20Q53R12 229 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 FBLIM1Q8WUP2 373 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 TMEM203Q969S6 136 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 MND1Q9BWT6 205 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 LSM2Q9Y333 95 aaKnown RBP10.94□□□□□ -0.66
TRAF4-212ENST00000498540 DNAH10Q8IVF4 4471 aa10.94□□□□□ -0.66
TRAF4-212ENST00000498540 A0A1B0GW64 132 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 E7EUB6 86 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 SPRY2O43597 315 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 FCGR3BO75015 233 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 DIRAS3O95661 229 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 CDK1P06493 297 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 BMI1P35226 326 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 MRPS15P82914 257 aaKnown RBP10.93□□□□□ -0.66
TRAF4-212ENST00000498540 OR2B11Q5JQS5 317 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 TMEM91Q6ZNR0 172 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 SLC25A42Q86VD7 318 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 H1FOOQ8IZA3 346 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-212ENST00000498540 C8orf59Q8N0T1 100 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-212ENST00000498540 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 FANCD2OSQ96PS1 177 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 GINS4Q9BRT9 223 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 TP53TG1Q9Y2A0 90 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
TRAF4-212ENST00000498540 HECTD4Q9Y4D8 3996 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 PCLOQ9Y6V0 5065 aa10.93□□□□□ -0.66
TRAF4-212ENST00000498540 TMEM272A0A1B0GTI8 110 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 NPIPB5A8MRT5 1133 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 DENRO43583 198 aaKnown RBP10.92□□□□□ -0.66
TRAF4-212ENST00000498540 IL6RP08887 468 aaPredicted RBP10.92□□□□□ -0.66
TRAF4-212ENST00000498540 SPHARQ15513 63 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 ANKRD55Q3KP44 614 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 C2orf76Q3KRA6 126 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 LIPKQ5VXJ0 399 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 UNQ9165/PRO28630Q6UXU0 137 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 Q6ZWC4 215 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 RAB3CQ96E17 227 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 DCUN1D5Q9BTE7 237 aa10.92□□□□□ -0.66
TRAF4-212ENST00000498540 IGKV1D-8A0A087WSZ0 117 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 DPPA5A6NC42 116 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 J3QRK9 145 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 AREGP15514 252 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 GNB3P16520 340 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 APOC4P55056 127 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 RPS25P62851 125 aaKnown RBP10.91□□□□□ -0.66
TRAF4-212ENST00000498540 RPL30P62888 115 aaKnown RBP10.91□□□□□ -0.66
TRAF4-212ENST00000498540 MED22Q15528 200 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 KCTD9Q7L273 389 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 PACRGLQ8N7B6 248 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 FYTTD1Q96QD9 318 aaKnown RBP10.91□□□□□ -0.66
TRAF4-212ENST00000498540 SLC2A9Q9NRM0 540 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 UBQLN2Q9UHD9 624 aa10.91□□□□□ -0.66
TRAF4-212ENST00000498540 A0A075B6Q4 140 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 MFNGO00587 321 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 KBTBD11O94819 623 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 ZNF735P0CB33 412 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 ATF4P18848 351 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-212ENST00000498540 MAP2K4P45985 399 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms