RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TMEM222Q9H0R3 208 aa10.83□□□□□ -0.68
CPNE1-227ENST00000498056 A0A0A6YYJ9 748 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-227ENST00000498056 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 CLDN34H7C241 214 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 SFT2D2O95562 160 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 HRASP01112 189 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 UCP1P25874 307 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 G6PCP35575 357 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 F2RL1P55085 397 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 DHODHQ02127 395 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 DHRS2Q13268 280 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 PSG5Q15238 335 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 ZNF585BQ52M93 769 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-227ENST00000498056 TMEM268Q5VZI3 342 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 LYG2Q86SG7 212 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 C5orf56Q8N8D9 126 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 OR8H1Q8NGG4 311 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 OR52B4Q8NGK2 314 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 GALNT14Q96FL9 552 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 SEC22CQ9BRL7 303 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 FBXL15Q9H469 300 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 PLEKHA2Q9HB19 425 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 TPSG1Q9NRR2 321 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 FAM212BQ9NTI7 297 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-227ENST00000498056 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
CPNE1-227ENST00000498056 KCNIP3Q9Y2W7 256 aa10.82□□□□□ -0.68
CPNE1-227ENST00000498056 C9orf170A2RU37 121 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 RRHO14718 337 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 NDUFA3O95167 84 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 IGLV2-23P01705 113 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 NQO2P16083 231 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 SRPXP78539 464 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 TMEM187Q14656 261 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 C9orf152Q5JTZ5 239 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 ZNF695Q8IW36 515 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 Q8N9W7 124 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 RHOVQ96L33 236 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 CLCC1Q96S66 551 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 RNF5Q99942 180 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 RASL11BQ9BPW5 248 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 NPFFR1Q9GZQ6 430 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
CPNE1-227ENST00000498056 FAM181BA6NEQ2 426 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 SRRM4A7MD48 611 aaKnown RBP10.8□□□□□ -0.68
CPNE1-227ENST00000498056 M0QZK8 103 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 FGF16O43320 207 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 KBTBD11O94819 623 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 KRASP01116 189 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 IGKV1-39P01597 117 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 IGKV1D-39P04432 117 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 CRYBA1P05813 215 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 LGALS7P47929 136 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 UBE2KP61086 200 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 GNB1P62873 340 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 C5orf64Q2M2E5 130 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 ANKRD55Q3KP44 614 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 OR4A47Q6IF82 309 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 LIN54Q6MZP7 749 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 LGI3Q8N145 548 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 FAM71E2Q8N5Q1 922 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 NPBQ8NG41 125 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 COQ8AQ8NI60 647 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 VSTM2AQ8TAG5 236 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 GLYATL2Q8WU03 294 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 ZFAND2BQ8WV99 257 aa10.8□□□□□ -0.68
CPNE1-227ENST00000498056 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
CPNE1-227ENST00000498056 ATG12O94817 140 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 DHFRP00374 187 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 CA2P00918 260 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 MECP2P51608 486 aaKnown RBP10.79□□□□□ -0.68
CPNE1-227ENST00000498056 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 TAF15Q92804 592 aaKnown RBP eCLIP10.79□□□□□ -0.68
CPNE1-227ENST00000498056 AIFM2Q9BRQ8 373 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 GPN1Q9HCN4 374 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-227ENST00000498056 PLSCR3Q9NRY6 295 aa10.79□□□□□ -0.68
CPNE1-227ENST00000498056 JMJD1CQ15652 2540 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 CREBL2O60519 120 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-227ENST00000498056 PRAF2O60831 178 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 OR2A4O95047 310 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 CDS2O95674 445 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 IGKV1-5P01602 117 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 OR2B8PP59922 312 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 TNXAQ16473 311 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 PPP1R27Q86WC6 154 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 SELENOHQ8IZQ5 122 aaKnown RBP10.78□□□□□ -0.68
CPNE1-227ENST00000498056 PUSL1Q8N0Z8 303 aaKnown RBP10.78□□□□□ -0.68
CPNE1-227ENST00000498056 UXS1Q8NBZ7 420 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 ZNF431Q8TF32 576 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-227ENST00000498056 ABHD5Q8WTS1 349 aa10.78□□□□□ -0.68
CPNE1-227ENST00000498056 IL22RA2Q969J5 263 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms