RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 ADTRPQ96IZ2 230 aa16.3■□□□□ 0.2
CLIC4-204ENST00000497755 RBM7Q9Y580 266 aaKnown RBP16.3■□□□□ 0.2
CLIC4-204ENST00000497755 DENRO43583 198 aaKnown RBP16.29■□□□□ 0.2
CLIC4-204ENST00000497755 DIRAS3O95661 229 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 SAA1P0DJI8 122 aaPredicted RBP16.29■□□□□ 0.2
CLIC4-204ENST00000497755 C10orf55Q5SWW7 151 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 LIPKQ5VXJ0 399 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 GPHB5Q86YW7 130 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 CACNG8Q8WXS5 425 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 MAFIPQ8WZ33 124 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 ST6GALNAC5Q9BVH7 336 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 DNAH10Q8IVF4 4471 aa16.29■□□□□ 0.2
CLIC4-204ENST00000497755 PTGES3LE9PB15 166 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 ACTL6BO94805 426 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 MRPS15P82914 257 aaKnown RBP16.28■□□□□ 0.2
CLIC4-204ENST00000497755 CDK10Q15131 360 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 MED22Q15528 200 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 FAM209BQ5JX69 171 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 SLC16A13Q7RTY0 426 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 TMEM61Q8N0U2 210 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 RAB3CQ96E17 227 aa16.28■□□□□ 0.2
CLIC4-204ENST00000497755 TMEM272A0A1B0GTI8 110 aa16.27■□□□□ 0.2
CLIC4-204ENST00000497755 C19orf35Q6ZS72 473 aa16.27■□□□□ 0.2
CLIC4-204ENST00000497755 MMD2Q8IY49 270 aa16.27■□□□□ 0.2
CLIC4-204ENST00000497755 H1FOOQ8IZA3 346 aaPredicted RBP16.27■□□□□ 0.2
CLIC4-204ENST00000497755 GINS4Q9BRT9 223 aa16.27■□□□□ 0.2
CLIC4-204ENST00000497755 GGTLC1Q9BX51 225 aa16.27■□□□□ 0.2
CLIC4-204ENST00000497755 RAB22AQ9UL26 194 aa16.27■□□□□ 0.2
CLIC4-204ENST00000497755 HMX3A6NHT5 357 aa16.26■□□□□ 0.19
CLIC4-204ENST00000497755 RPS25P62851 125 aaKnown RBP16.26■□□□□ 0.19
CLIC4-204ENST00000497755 ZNF57Q68EA5 555 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-204ENST00000497755 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
CLIC4-204ENST00000497755 UFD1Q92890 307 aa16.26■□□□□ 0.19
CLIC4-204ENST00000497755 MLXQ9UH92 298 aa16.26■□□□□ 0.19
CLIC4-204ENST00000497755 FBXL7Q9UJT9 491 aa16.26■□□□□ 0.19
CLIC4-204ENST00000497755 ZNF257Q9Y2Q1 563 aa16.26■□□□□ 0.19
CLIC4-204ENST00000497755 LOC102724200A0A096LPH7 203 aaPredicted RBP16.25■□□□□ 0.19
CLIC4-204ENST00000497755 TMEM213A2RRL7 107 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 CXorf65A6NEN9 183 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 TEX22C9J3V5 150 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 CREBL2O60519 120 aaPredicted RBP16.25■□□□□ 0.19
CLIC4-204ENST00000497755 IGHV3-23P01764 117 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 GNB3P16520 340 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.196e-10■■■■■ 36.9
CLIC4-204ENST00000497755 PMS2P11Q13670 270 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 IRF3Q14653 427 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 OR52B4Q8NGK2 314 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 DCUN1D5Q9BTE7 237 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 V9GY05 133 aa16.25■□□□□ 0.19
CLIC4-204ENST00000497755 IGKV1D-8A0A087WSZ0 117 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 E7EUB6 86 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 MFNGO00587 321 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 FCGR3BO75015 233 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 ARL6IP5O75915 188 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 NDUFB8O95169 186 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 IL6RP08887 468 aaPredicted RBP16.24■□□□□ 0.19
CLIC4-204ENST00000497755 CLEC19AQ6UXS0 136 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 VKORC1L1Q8N0U8 176 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 UXS1Q8NBZ7 420 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 CCDC140Q96MF4 163 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 FANCD2OSQ96PS1 177 aa16.24■□□□□ 0.19
CLIC4-204ENST00000497755 ZNF320A2RRD8 509 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 NPIPB5A8MRT5 1133 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 RAB27BO00194 218 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 SCAF4O95104 1147 aaKnown RBP16.23■□□□□ 0.19
CLIC4-204ENST00000497755 CALRP27797 417 aaKnown RBP16.23■□□□□ 0.19
CLIC4-204ENST00000497755 ARL3P36405 182 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 HES5Q5TA89 166 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 OR10R2Q8NGX6 335 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 OR51E2Q9H255 320 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 S4R3C0 116 aa16.23■□□□□ 0.19
CLIC4-204ENST00000497755 A0A075B6Q4 140 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 A0A0J9YWU9 116 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 A0A1B0GW64 132 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 J3QRK9 145 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 RPL30P62888 115 aaKnown RBP16.22■□□□□ 0.19
CLIC4-204ENST00000497755 TRAM1Q15629 374 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 FAM106AQ4KMX7 169 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 TM4SF20Q53R12 229 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 CEMP1Q6PRD7 247 aaPredicted RBP16.22■□□□□ 0.19
CLIC4-204ENST00000497755 Q6ZS49 121 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 WFDC3Q8IUB2 231 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 SLC2A9Q9NRM0 540 aa16.22■□□□□ 0.19
CLIC4-204ENST00000497755 NUPR2A6NF83 97 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 A8MWP6 167 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 CRYGCP07315 174 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 HSMCR30P0CW71 290 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 HIST1H1DP16402 221 aaKnown RBP16.21■□□□□ 0.19
CLIC4-204ENST00000497755 RANBP1P43487 201 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 PSMD7P51665 324 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 FABP5Q01469 135 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 KLK9Q2XQG4 91 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 ANKRD55Q3KP44 614 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 OGFRL1Q5TC84 451 aaPredicted RBP16.21■□□□□ 0.19
CLIC4-204ENST00000497755 ZNF645Q8N7E2 425 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 CENPOQ9BU64 300 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 KLK9Q9UKQ9 250 aa16.21■□□□□ 0.19
CLIC4-204ENST00000497755 IGLV2-14P01704 120 aa16.2■□□□□ 0.18
CLIC4-204ENST00000497755 PSMA1P25786 263 aaKnown RBP16.2■□□□□ 0.18
CLIC4-204ENST00000497755 TNFRSF9Q07011 255 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms