RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TSTD3H0UI37 97 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 TRANK1O15050 2925 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 CHST10O43529 356 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 EIF1BO60739 113 aaKnown RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 PFN1P07737 140 aaKnown RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 FGF6P10767 208 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 PSG2P11465 335 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 IDO1P14902 403 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 EIF1P41567 113 aaKnown RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 PSMB3P49720 205 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 TCTAP57738 103 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 DAZ2Q13117 558 aaKnown RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 APOFQ13790 326 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 NLRC5Q86WI3 1866 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 YIPF7Q8N8F6 280 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 Q8N9P0 234 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 OR52L1Q8NGH7 329 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 OR13C6PQ8NH95 151 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 APOBEC3DQ96AK3 386 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 GINS3Q9BRX5 216 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 ABCG5Q9H222 651 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 DAZ3Q9NR90 486 aaKnown RBP4.25□□□□□ -1.73
BRCA1-224ENST00000497488 TAS2R1Q9NYW7 299 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 ERGIC3Q9Y282 383 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 SLC35A3Q9Y2D2 325 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 WASHC3Q9Y3C0 194 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 TRAV8-1A0A0A6YYK1 113 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 IGHV5-10-1A0A0J9YXX1 117 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 INMT-MINDY4F8WBC2 141 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 GPR31O00270 319 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 LINC01565O15544 149 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 IGHG2P01859 326 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 IGHV4-34P06331 123 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 FBP1P09467 338 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 CCL1P22362 96 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 CD34P28906 385 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 HSPA9P38646 679 aaKnown RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 INPP1P49441 399 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 ZNF133P52736 654 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 SBSNQ6UWP8 590 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 PDPNQ86YL7 162 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 C20orf196Q8IYI0 205 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 OR5H2Q8NGV7 314 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 LINC01006Q8NI28 216 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 TMEM158Q8WZ71 300 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 SLC25A44Q96H78 314 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 ZNF414Q96IQ9 312 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 ZNF2Q9BSG1 426 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 GTSF1LQ9H1H1 148 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 RPP21Q9H633 154 aaKnown RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 C14orf105Q9NVL8 296 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 TAC3Q9UHF0 121 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 PCYT1BQ9Y5K3 369 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-224ENST00000497488 RALGAPA2Q2PPJ7 1873 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 PLXNA4Q9HCM2 1894 aa4.24□□□□□ -1.73
BRCA1-224ENST00000497488 DYSFO75923 2080 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 MUC3AQ02505 3323 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 SPTBN5Q9NRC6 3674 aaKnown RBP4.23□□□□□ -1.73
BRCA1-224ENST00000497488 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 C5orf63A6NC05 138 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 ZNF850A8MQ14 1090 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 IGHMP01871 453 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 CRHP06850 196 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 IGHV1-8P0DP01 117 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 IFI30P13284 250 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 HSPE1P61604 102 aaKnown RBP4.23□□□□□ -1.73
BRCA1-224ENST00000497488 SMCO1Q147U7 214 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 MPPED2Q15777 294 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 TMEM241Q24JQ0 296 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 MRPL2Q5T653 305 aaKnown RBP4.23□□□□□ -1.73
BRCA1-224ENST00000497488 C18orf65Q6ZTR6 163 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 GRINAQ7Z429 371 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 OOSP2Q86WS3 158 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 ZBTB8OSQ8IWT0 167 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 DCAF4L2Q8NA75 395 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 LINC00301Q8NCQ3 95 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 OR13D1Q8NGV5 346 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 OR8S1Q8NH09 359 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 MAFIPQ8WZ33 124 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 FAM107BQ9H098 131 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 RNASE7Q9H1E1 156 aaKnown RBP4.23□□□□□ -1.73
BRCA1-224ENST00000497488 CMTM6Q9NX76 183 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 PYCARDQ9ULZ3 195 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 A0A0C4DFX4 3053 aa4.23□□□□□ -1.73
BRCA1-224ENST00000497488 PCNX3Q9H6A9 2034 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 IGKV1-6A0A0C4DH72 117 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 ARL5CA6NH57 179 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 H0YJW9 148 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 MRASO14807 208 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 IGKV1-39P01597 117 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 IGKV1D-39P04432 117 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 SEC11BP0C7V7 166 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 SULT1A3P0DMM9 295 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 SULT1A4P0DMN0 295 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms