RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 MDFIC2A0A1B0GVS7 189 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 SHOXO15266 292 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 CREBL2O60519 120 aaPredicted RBP15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 RAMP3O60896 148 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 RNASE1P07998 156 aaKnown RBP15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 VSIG10L2P0DP72 767 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 LPAR6P43657 344 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 HES1Q14469 280 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 SLC9A3R2Q15599 337 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 TRIM16LQ309B1 348 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 VMA21Q3ZAQ7 101 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 MITD1Q8WV92 249 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 RHOVQ96L33 236 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 HARBI1Q96MB7 349 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 BET1LQ9NYM9 111 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 MOB4Q9Y3A3 225 aa15.77■□□□□ 0.12
SCAMP3-209ENST00000497470 RRHO14718 337 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 NBR2O15453 112 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 TCF21O43680 179 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 IGLV2-23P01705 113 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 HLA-AP01891 365 aaKnown RBP15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 CRYGBP07316 175 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 ANXA7P20073 488 aaKnown RBP15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 C4orf46Q504U0 113 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 PUSL1Q8N0Z8 303 aaKnown RBP15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 FAM71E2Q8N5Q1 922 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 COQ8AQ8NI60 647 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 ZNF431Q8TF32 576 aaPredicted RBP15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 LSM10Q969L4 123 aaKnown RBP15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 SEC22AQ96IW7 307 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 GPHA2Q96T91 129 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 RANBP3Q9H6Z4 567 aaPredicted RBP15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 KIAA1456Q9P272 454 aa15.76■□□□□ 0.11
SCAMP3-209ENST00000497470 MXRA5Q9NR99 2828 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 C7orf66A4D0T2 115 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 MARCH11A6NNE9 402 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 VDAC1P21796 283 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 VAMP1P23763 118 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 PAX6P26367 422 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 ERVK-16P61578 105 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 SLC25A33Q9BSK2 321 aa15.75■□□□□ 0.11
SCAMP3-209ENST00000497470 DNAJC9-AS1A6NH13 148 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 SRRM4A7MD48 611 aaKnown RBP15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 P0C879 139 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 SLC25A6P12236 298 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 MAS1LP35410 378 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 RAB25P57735 213 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 PSG5Q15238 335 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 MMDQ15546 238 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 C5orf64Q2M2E5 130 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 ZNF695Q8IW36 515 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 Q8N9W7 124 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 TMEM167AQ8TBQ9 72 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 R3HDM4Q96D70 268 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 PHB2Q99623 299 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 ZNF580Q9UK33 172 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 TMED3Q9Y3Q3 217 aa15.74■□□□□ 0.11
SCAMP3-209ENST00000497470 OR2A4O95047 310 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 S1PR2O95136 353 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 IGKV1-39P01597 117 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 HLA-DRB1P01911 266 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 IGKV1D-39P04432 117 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 SP6Q3SY56 376 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 SELENOHQ8IZQ5 122 aaKnown RBP15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 C5orf56Q8N8D9 126 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 OR2A7Q96R45 310 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 CHIAQ9BZP6 476 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 COA4Q9NYJ1 87 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 SIGLEC9Q9Y336 463 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 MMP24Q9Y5R2 645 aa15.73■□□□□ 0.11
SCAMP3-209ENST00000497470 DBX1A6NMT0 343 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 TRIM77I1YAP6 450 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 SPNP16150 400 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 HLA-GP17693 338 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 CD24P25063 80 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 F2RL1P55085 397 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 UBA52P62987 128 aaKnown RBP15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 AARDQ4LEZ3 155 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 OR2B11Q5JQS5 317 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 PPP1R27Q86WC6 154 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 MMD2Q8IY49 270 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 RRNAD1Q96FB5 475 aaKnown RBP15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 RITA1Q96K30 269 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 NPFFR1Q9GZQ6 430 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 ESM1Q9NQ30 184 aa15.72■□□□□ 0.11
SCAMP3-209ENST00000497470 GPR137BO60478 399 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 HNF4GQ14541 408 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 TMEM268Q5VZI3 342 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 ZNF562Q6V9R5 426 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 FOXRED2Q8IWF2 684 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 Q8N2B8 174 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 RASL11BQ9BPW5 248 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 FKBP11Q9NYL4 201 aa15.71■□□□□ 0.11
SCAMP3-209ENST00000497470 KBTBD11O94819 623 aa15.7■□□□□ 0.1
SCAMP3-209ENST00000497470 KRASP01116 189 aa15.7■□□□□ 0.1
SCAMP3-209ENST00000497470 AMY1AP04745 511 aa15.7■□□□□ 0.1
SCAMP3-209ENST00000497470 SAA1P0DJI8 122 aaPredicted RBP15.7■□□□□ 0.1
SCAMP3-209ENST00000497470 TATDN3Q17R31 274 aa15.7■□□□□ 0.1
SCAMP3-209ENST00000497470 ANKRD55Q3KP44 614 aa15.7■□□□□ 0.1
SCAMP3-209ENST00000497470 OR4A47Q6IF82 309 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms