RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LINC00205P59089 165 aa12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 PRSS8Q16651 343 aa12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 RBM7Q9Y580 266 aaKnown RBP12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 BET1O15155 118 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 TUSC2O75896 110 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 SCGNO76038 276 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 SLC22A5O76082 557 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 ACTL6BO94805 426 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 TPPPO94811 219 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 FCGR3AP08637 254 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 HIST1H1DP16402 221 aaKnown RBP12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 CD36P16671 472 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 SCAND1P57086 179 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 ATP5G2Q06055 141 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 SFXN4Q6P4A7 337 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 LINC00322Q6ZN03 302 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 NECAP1Q8NC96 275 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 VCX3AQ9NNX9 186 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 CEPT1Q9Y6K0 416 aa12.79□□□□□ -0.36
TRAPPC3-207ENST00000497251 A0A087WXM4 84 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 SMIM30A4D0T7 59 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 SRRM4A7MD48 611 aaKnown RBP12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 MPPED1O15442 326 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 TMEM127O75204 238 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 SDC2P34741 201 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 TIMM50Q3ZCQ8 353 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 DDB2Q92466 427 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 GINS4Q9BRT9 223 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 ATG5Q9H1Y0 275 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 TECRQ9NZ01 308 aaKnown RBP12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 DAPK2Q9UIK4 370 aa12.78□□□□□ -0.36
TRAPPC3-207ENST00000497251 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 LOC100506127A0A0U1RQW1 187 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 CTXN2P0C2S0 81 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 GSTT2P0CG29 244 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 GSTT2BP0CG30 244 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 GNB3P16520 340 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 DUTP33316 252 aaKnown RBP12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 RHOGP84095 191 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 IGSF11Q5DX21 431 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 MMD2Q8IY49 270 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 TTC9CQ8N5M4 171 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 HIPK2Q9H2X6 1198 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 PRELID3BQ9Y3B1 194 aa12.77□□□□□ -0.37
TRAPPC3-207ENST00000497251 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 SNRPBP14678 240 aaKnown RBP12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 TALDO1P37837 337 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 CDK10Q15131 360 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 TNXAQ16473 311 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 NEURL2Q9BR09 285 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 AKIP1Q9NQ31 210 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 ZNF230Q9UIE0 474 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 ETV7Q9Y603 341 aa12.76□□□□□ -0.37
TRAPPC3-207ENST00000497251 A0A075B6Q4 140 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 LGALS9O00182 355 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 CRYZL1O95825 349 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 TRBV12-3P01733 135 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 DTYMKP23919 212 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 CD81P60033 236 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 MXD1Q05195 221 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 ARFRP1Q13795 201 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 EXOSC2Q13868 293 aaKnown RBP12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 H1FOOQ8IZA3 346 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 RNF167Q9H6Y7 350 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 ZC4H2Q9NQZ6 224 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 MRPS7Q9Y2R9 242 aaKnown RBP12.75□□□□□ -0.37
TRAPPC3-207ENST00000497251 BMPR1BO00238 502 aa12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 GGCTO75223 188 aaKnown RBP12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 KIR2DS2P43631 304 aa12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 DEFB114Q30KQ6 69 aa12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 CD300EQ496F6 205 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 GPHB5Q86YW7 130 aa12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 LGALS14Q8TCE9 139 aa12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 ACOT12Q8WYK0 555 aa12.74□□□□□ -0.37
TRAPPC3-207ENST00000497251 IZUMO1RA6ND01 250 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 ZNF785A8K8V0 405 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 DHFRP00374 187 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 MAS1LP35410 378 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 CDNFQ49AH0 187 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 HACD4Q5VWC8 232 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 ADAMTSL5Q6ZMM2 481 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 SLC16A13Q7RTY0 426 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 CROCCP3Q8IVE0 287 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 ZNF645Q8N7E2 425 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 YIPF6Q96EC8 236 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 DCSTAMPQ9H295 470 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 ZNF430Q9H8G1 570 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 RHBDL2Q9NX52 303 aa12.73□□□□□ -0.37
TRAPPC3-207ENST00000497251 A0A0A6YYH2 397 aa12.72□□□□□ -0.37
TRAPPC3-207ENST00000497251 A6NJ64 397 aa12.72□□□□□ -0.37
TRAPPC3-207ENST00000497251 LINC00473A8K010 186 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms