RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TDRD6O60522 2096 aaKnown RBP10.88□□□□□ -0.67
VEGFA-215ENST00000497139 A0A1B0GX78 115 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 C9orf172C9J069 976 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 NTF3P20783 257 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 PLA2G5P39877 138 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 C1orf61Q13536 156 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 ZNF542PQ5EBM4 170 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 C18orf32Q8TCD1 76 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 WASHC3Q9Y3C0 194 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 OR2T8A6NH00 312 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 C10orf142B7Z368 130 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 CRXO43186 299 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-215ENST00000497139 HSBP1O75506 76 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 WISP2O76076 250 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 ZNF16P17020 682 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-215ENST00000497139 FAM19A2Q8N3H0 131 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 ABHD3Q8WU67 409 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 PRDM14Q9GZV8 571 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 TMEM38BQ9NVV0 291 aa10.88□□□□□ -0.67
VEGFA-215ENST00000497139 SMIM27A0A1W2PRY6 76 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 ISLRO14498 428 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 FRMD6-AS1P0C7T7 363 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 SCGB1A1P11684 91 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 PAX2Q02962 417 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 RNFT1Q5M7Z0 435 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 C1orf185Q5T7R7 199 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 LCN12Q6JVE5 192 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 SLC25A34Q6PIV7 304 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 C20orf204Q6ZNR8 217 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 CPT1CQ8TCG5 803 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 OR2D2Q9H210 308 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 C2orf70A6NJV1 201 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 G3V4G9 280 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 RAB29O14966 203 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 IGLC1P0CG04 106 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 ZNF32P17041 273 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 S100A7P31151 101 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 PSG9Q00887 426 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 IGFBP7Q16270 282 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 FAM69BQ5VUD6 431 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 MRPL54Q6P161 138 aaKnown RBP10.87□□□□□ -0.67
VEGFA-215ENST00000497139 C1QTNF5Q9BXJ0 243 aa10.87□□□□□ -0.67
VEGFA-215ENST00000497139 C19orf25Q9UFG5 118 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-215ENST00000497139 YTHDF2Q9Y5A9 579 aaKnown RBP10.87□□□□□ -0.67
VEGFA-215ENST00000497139 ODAMA1E959 279 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 M0R2Z0 102 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 DEFA4P12838 97 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 GCHFRP30047 84 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 GNG4P50150 75 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 CEACAM21Q3KPI0 293 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 Q56UQ5 140 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 DRAM1Q8N682 238 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 TMEM70Q9BUB7 260 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 LRRC61Q9BV99 259 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 SF3B5Q9BWJ5 86 aaKnown RBP10.86□□□□□ -0.67
VEGFA-215ENST00000497139 SAP30LQ9HAJ7 183 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 OR1A1Q9P1Q5 309 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 KMT2EQ8IZD2 1858 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 ZG16O60844 167 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 NUDT3O95989 172 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 EBLN2Q6P2I7 272 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 WDR31Q8NA23 367 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 OR1L3Q8NH93 324 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 OR2H1Q9GZK4 316 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 COMMD5Q9GZQ3 224 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 TNRC6BQ9UPQ9 1833 aaKnown RBP10.86□□□□□ -0.67
VEGFA-215ENST00000497139 HSPB6O14558 160 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 CGAP01215 116 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 CRYBB3P26998 211 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 PRSS12P56730 875 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 EDDM3BP56851 147 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 RELBQ01201 579 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 ANKRD37Q7Z713 158 aa10.86□□□□□ -0.67
VEGFA-215ENST00000497139 THAP3Q8WTV1 239 aaPredicted RBP10.86□□□□□ -0.67
VEGFA-215ENST00000497139 OR7C2O60412 319 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 CLDN14O95500 239 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 HIST1H1AQ02539 215 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-215ENST00000497139 RBPJQ06330 500 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 RAB30Q15771 203 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 GCSAMLQ5JQS6 135 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 IL1F10Q8WWZ1 152 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 NEUROG1Q92886 237 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 ZNF331Q9NQX6 463 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-215ENST00000497139 DNPH1O43598 174 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 CEACAM3P40198 252 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 ARL4DP49703 201 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 CCR5P51681 352 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 TMPRSS3P57727 454 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 CATR1Q13166 79 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 FER1L6-AS1Q8NA97 138 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 WNT16Q9UBV4 365 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 SPAG17Q6Q759 2223 aa10.85□□□□□ -0.67
VEGFA-215ENST00000497139 TRAV24A0A0B4J272 114 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 IGHV3-20A0A0C4DH32 117 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms