RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GPR183P32249 361 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 DRD3P35462 400 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 EMDP50402 254 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 RND2P52198 227 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 POLR2JP52435 117 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 OR1D5P58170 312 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TAS2R46P59540 309 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 SEC11AP67812 179 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 MRPS21P82921 87 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 ACSF3Q4G176 576 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 PAGE3Q5JUK9 113 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 BVES-AS1Q5T3Y7 98 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ZNF626Q68DY1 528 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 LCN15Q6UWW0 184 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TMEM91Q6ZNR0 172 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TGIF2LYQ8IUE0 185 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 LINC01561Q8N1V8 128 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TPRX1Q8N7U7 411 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 POP5Q969H6 163 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 TMEM54Q969K7 222 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 C9orf85Q96MD7 179 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 SCGB3A2Q96PL1 93 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 S1PR3Q99500 378 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 FOXC2Q99958 501 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PDCD1LG2Q9BQ51 273 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TMEM70Q9BUB7 260 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 POMKQ9H5K3 350 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ZNF442Q9H7R0 627 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PARP11Q9NR21 331 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TMEM242Q9NWH2 141 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 NDUFB11Q9NX14 153 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 DLL3Q9NYJ7 618 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ARHGEF5Q12774 1597 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TRPM2O94759 1503 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TMED7-TICAM2A0A0A6YYA0 188 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 F8W1H4 67 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 H3BRM9 83 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TMEM178BH3BS89 294 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PRYO14603 147 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 NPIPB7O75200 414 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PMS2P2O95744 297 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TBX6O95947 436 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 TNFP01375 233 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 HOXB6P17509 224 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 LOXP28300 417 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 HOXD3P31249 432 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 KIR2DS2P43631 304 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PGFP49763 221 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 WDR5P61964 334 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 GAGE2BQ13066 116 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 EIF3IQ13347 325 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 CLEC12BQ2HXU8 276 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 GAGE2EQ4V326 116 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ENTPD8Q5MY95 495 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 IBA57Q5T440 356 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 DPPA3Q6W0C5 159 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ZNF575Q86XF7 245 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 C1orf158Q8N1D5 194 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 OR4K17Q8NGC6 315 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 OSR1Q8TAX0 266 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 RTN4IP1Q8WWV3 396 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 ADAT3Q96EY9 351 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 SLC25A21Q9BQT8 299 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 SPANXDQ9BXN6 97 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 HES7Q9BYE0 225 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 SLC35B3Q9H1N7 401 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 CXXC4Q9H2H0 198 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 Q9H8V8 135 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TAS2R5Q9NYW4 299 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TVP23BQ9NYZ1 205 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 COMMD9Q9P000 198 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 GAGE2DQ9UEU5 116 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 Q9UF83 564 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 IL36AQ9UHA7 158 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PROCRQ9UNN8 238 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ATG2AQ2TAZ0 1938 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ANKRD36CQ5JPF3 1778 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 TNS1Q9HBL0 1735 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 A0A087X0T9 212 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 C9JQL5 133 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 TMEM250H0YL14 139 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 K7ENP7 123 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 CXCL13O43927 109 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 LGALS1P09382 135 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 H2BFMP0C1H6 154 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RFPL3SP0C7P2 107 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 KLK2P20151 261 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 SUMO2P61956 95 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 PNRC1Q12796 327 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 UNC119Q13432 240 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 PMAIP1Q13794 54 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 KLF9Q13886 244 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 DIAPH2-AS1Q14236 149 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 TMEM52BQ4KMG9 183 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 LYRM7Q5U5X0 104 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 Q5XG85 94 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 SFRP4Q6FHJ7 346 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 C11orf87Q6NUJ2 197 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 SHISA6Q6ZSJ9 500 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms