RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 FAM60AQ9NP50 221 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 ZNRD1Q9P1U0 126 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 DNAJC12Q9UKB3 198 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 FIS1Q9Y3D6 152 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 A0A096LNJ9 63 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 TRBV6-6A0A0A6YYG2 114 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 A0A1B0GV50 99 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 A0A1W2PP18 115 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 A0A1W2PQ67 120 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 SIGLEC16A6NMB1 481 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 COX7A2LO14548 114 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 HMGB3O15347 200 aaKnown RBP2.93□□□□□ -1.94
SNX13-211ENST00000496855 ORC5O43913 435 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 SCO1O75880 301 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 CA7P43166 264 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 RWDD2BP57060 319 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 FGF12P61328 243 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 SMCO1Q147U7 214 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 PLPPR5Q32ZL2 321 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 KLHL12Q53G59 568 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 DHFR2Q86XF0 187 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 GPHB5Q86YW7 130 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 LINC01560Q8TB33 94 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 C11orf40Q8WZ69 217 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 STARD4Q96DR4 205 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 TAAR3PQ9P1P4 343 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 CYSLTR1Q9Y271 337 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 CLASP1Q7Z460 1538 aa2.93□□□□□ -1.94
SNX13-211ENST00000496855 LRP5O75197 1615 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 AHDC1Q5TGY3 1603 aaPredicted RBP2.92□□□□□ -1.94
SNX13-211ENST00000496855 MAP1LC3B2A6NCE7 125 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 OR5H14A6NHG9 310 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.92□□□□□ -1.94
SNX13-211ENST00000496855 RGS5O15539 181 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 S100GP29377 79 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 S100A7P31151 101 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 OPRK1P41145 380 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 FABP9Q0Z7S8 132 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 C5orf46Q6UWT4 87 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 OR11G2Q8NGC1 345 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 OR8A1Q8NGG7 326 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 BORCS5Q969J3 196 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 EXOSC8Q96B26 276 aaKnown RBP2.92□□□□□ -1.94
SNX13-211ENST00000496855 CMBLQ96DG6 245 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 IGF2BP2-AS1Q96M15 143 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 PEBP4Q96S96 227 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 MAP1LC3BQ9GZQ8 125 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 IFI27L2Q9H2X8 130 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 ZNF355PQ9NSJ1 428 aa2.92□□□□□ -1.94
SNX13-211ENST00000496855 IGHV3OR15-7A0A075B7D8 119 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 IGHV1-3A0A0C4DH29 117 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 IGHV1-69-2A0A0G2JMI3 117 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 A0A0J9YY10 115 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 A0A1B0GX78 115 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 A8MWP4 228 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 KPNA4O00629 521 aaPredicted RBP2.91□□□□□ -1.94
SNX13-211ENST00000496855 CDRT1O95170 752 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 LGALS1P09382 135 aaKnown RBP2.91□□□□□ -1.94
SNX13-211ENST00000496855 NTF3P20783 257 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 OPRM1P35372 400 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 NCALDP61601 193 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 CST6Q15828 149 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 TMEM128Q5BJH2 165 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 Q5W150 140 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 DCUN1D2Q6PH85 259 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 SGPP2Q8IWX5 399 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 GNPDA2Q8TDQ7 276 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 RAB2BQ8WUD1 216 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 SLC25A46Q96AG3 418 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 MS4A6EQ96DS6 147 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 DNAJC30Q96LL9 226 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 TRIB3Q96RU7 358 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 OR2D2Q9H210 308 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 SH3BGRL3Q9H299 93 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 PRTFDC1Q9NRG1 225 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 CYTL1Q9NRR1 136 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 TP73-AS1Q9UF72 201 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 CEP170Q5SW79 1584 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 STRCQ7RTU9 1775 aa2.91□□□□□ -1.94
SNX13-211ENST00000496855 hCG_1818297A0A087WSY0 165 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 IGKV1D-43A0A0B4J1Z2 117 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 A8MT66 165 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 CCNKO75909 580 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 CSN2P05814 226 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 TFPTP0C1Z6 253 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 SPI1P17947 270 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 PHBP35232 272 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 PPP1CCP36873 323 aaKnown RBP2.9□□□□□ -1.94
SNX13-211ENST00000496855 LINC00315P59091 139 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 KRTAP10-1P60331 282 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 OR13C8Q8NGS7 320 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 FRZBQ92765 325 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 C11orf68Q9H3H3 251 aaKnown RBP2.9□□□□□ -1.94
SNX13-211ENST00000496855 LHX9Q9NQ69 397 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 LYRM2Q9NU23 88 aaPredicted RBP2.9□□□□□ -1.94
SNX13-211ENST00000496855 PHLDA3Q9Y5J5 127 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 IGSF9BQ9UPX0 1349 aa2.9□□□□□ -1.94
SNX13-211ENST00000496855 RPRD2Q5VT52 1461 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms