RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 PGLYRP3Q96LB9 341 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 WNT6Q9Y6F9 365 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 UNC13BO14795 1591 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 ARFGEF3Q5TH69 2177 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 PTPRZ1P23471 2315 aaPredicted RBP5.05□□□□□ -1.6
USF3-204ENST00000496826 IGKV3D-15A0A087WSY6 115 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 IGKV3-15P01624 115 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 IQCF3P0C7M6 154 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 TREML2Q5T2D2 321 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 B3GNT8Q7Z7M8 397 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SIRT6Q8N6T7 355 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 CCL19Q99731 98 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SCN5AQ14524 2016 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A1W2PRF3 423 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A1W2PRM7 423 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 NPIPB11E5RHQ5 1161 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 NCR2O95944 276 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 IGHG2P01859 326 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 IGHG4P01861 327 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 CD28P10747 220 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 IL9P15248 144 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 GAS1P54826 345 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 APOC4P55056 127 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 TMEM187Q14656 261 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 LINC01620Q4KN68 170 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 ACER2Q5QJU3 275 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SAXO2Q658L1 398 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 FFAR1O14842 300 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CCL5P13501 91 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 FOXA1P55317 472 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 HSD52Q0P140 79 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 DEFB119Q8N690 84 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 ITLN2Q8WWU7 325 aaPredicted RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 PRSS22Q9GZN4 317 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 HAPLN2Q9GZV7 340 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 A0A1B0GUT8 65 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 FAM90A20PA6NIJ5 464 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 FAM90A27PA6NNH2 459 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 C9JCJ5 164 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 TBX18O95935 607 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 PRR35P0CG20 571 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 KLK7P49862 253 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 LCN2P80188 198 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 SPEM1Q8N4L4 309 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 C14orf132Q9NPU4 83 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CADP27708 2225 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 UMODP07911 640 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 HTN3P15516 51 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 NOXO1Q8NFA2 376 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 SPSB4Q96A44 273 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 MS4A6EQ96DS6 147 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 SIGLEC10Q96LC7 697 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CCDC140Q96MF4 163 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 TM2D2Q9BX73 214 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CHODLQ9H9P2 273 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 C16orf97H3BN30 126 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 M0R381 172 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CLDN14O95500 239 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CRYBB2P43320 205 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 SDHAF4Q5VUM1 108 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 PDLIM5Q96HC4 596 aaKnown RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 SLC25A10Q9UBX3 287 aaPredicted RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 TRPM6Q9BX84 2022 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 A0A087WWV3 80 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 C15orf62A8K5M9 175 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 SPRED2Q7Z698 418 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 FBXO27Q8NI29 283 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 ABCA6Q8N139 1617 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 WTIPA6NIX2 430 aaPredicted RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 ATP5G1P05496 136 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 ATP5G3P48201 142 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 CD69Q07108 199 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 TMEM155Q4W5P6 130 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 APOBEC3HQ6NTF7 200 aaKnown RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 TEX43Q6ZNM6 134 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 PPP1R32Q7Z5V6 425 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 UMODL1-AS1Q8N2C9 162 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 TMEM99Q8N816 258 aa5.04□□□□□ -1.6
USF3-204ENST00000496826 RPP21Q9H633 154 aaKnown RBP5.04□□□□□ -1.6
USF3-204ENST00000496826 A0A0G2JK05 382 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 ZNF137PP52743 207 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 KLF5Q13887 457 aaPredicted RBP5.03□□□□□ -1.6
USF3-204ENST00000496826 RFESDQ8TAC1 157 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 ZNF721Q8TF20 911 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 CHCHD1Q96BP2 118 aaKnown RBP5.03□□□□□ -1.6
USF3-204ENST00000496826 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 PI4KAP42356 2102 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 OCIAD2Q56VL3 154 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 Q6ZVL8 140 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 NEURL3Q96EH8 262 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 CALYQ9NYX4 217 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 EMCNQ9ULC0 261 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 FZR1Q9UM11 496 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 NRKQ7Z2Y5 1582 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 A0A1B0GV90 55 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 OVOL1O14753 267 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 SPINK4O60575 86 aa5.03□□□□□ -1.6
USF3-204ENST00000496826 TNFSF15O95150 251 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms