RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 VSX2P58304 361 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CDC42P60953 191 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 DEFA5Q01523 94 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 EMX2Q04743 252 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 FABP9Q0Z7S8 132 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 LGALSLQ3ZCW2 172 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-212ENST00000496458 FAM74A1Q5RGS3 127 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SCIMPQ6UWF3 145 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 S100A7AQ86SG5 101 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 OR4C13Q8NGP0 309 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 OR1N2Q8NGR9 330 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TERB2Q8NHR7 220 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 PPTC7Q8NI37 304 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 RXFP4Q8TDU9 374 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 ACOT12Q8WYK0 555 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 RGP1Q92546 391 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-212ENST00000496458 FAM3DQ96BQ1 224 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SEH1LQ96EE3 360 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 FCRL1Q96LA6 429 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 PITX2Q99697 317 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 NIPSNAP1Q9BPW8 284 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 DEFB127Q9H1M4 99 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 MS4A6AQ9H2W1 248 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CLMPQ9H6B4 373 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 METTL17Q9H7H0 456 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TUBA4BQ9H853 241 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 RBFOX1Q9NWB1 397 aaKnown RBP3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SMPXQ9UHP9 88 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 FARSAQ9Y285 508 aaKnown RBP3.19□□□□□ -1.9
SF3B1-212ENST00000496458 OR51B4Q9Y5P0 310 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 SLC25A15Q9Y619 301 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 TRIOO75962 3097 aa3.19□□□□□ -1.9
SF3B1-212ENST00000496458 CDH23Q9H251 3354 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 YLPM1P49750 1951 aaKnown RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 CHD5Q8TDI0 1954 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 COLCA2A8K830 154 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 DISC1C4P0D8 188 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 MRASO14807 208 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 KLRC4O43908 158 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 IFNA21P01568 189 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 MT-ND4LP03901 98 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 SERPINE1P05121 402 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 BPGMP07738 259 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 HTR1AP08908 422 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 MMP7P09237 267 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 GABRA1P14867 456 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 ALOX5APP20292 161 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 ELK4P28324 431 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 GGT2P36268 569 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 GCLMP48507 274 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 SULT1A1P50225 295 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 SULT1A2P50226 295 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TDGF1P3P51864 188 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 CCL23P55773 120 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 DNAJB13P59910 316 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 NCS1P62166 190 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 RPS23P62266 143 aaKnown RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 EIF5AP63241 154 aaKnown RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 EMX1Q04741 257 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OR2F1Q13607 317 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 PEA15Q15121 130 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TTC32Q5I0X7 151 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 PYY3Q5JQD4 70 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 HIST2H3PS2Q5TEC6 136 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TMEM42Q69YG0 159 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 LCN12Q6JVE5 192 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 GRINAQ7Z429 371 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TMED4Q7Z7H5 227 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OAFQ86UD1 273 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 LRRC28Q86X40 367 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 NIT1Q86X76 327 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 LGI3Q8N145 548 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OR6V1Q8N148 313 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 ACBD7Q8N6N7 88 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OR8J3Q8NGG0 315 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OR13G1Q8NGZ3 307 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OR2G3Q8NGZ4 309 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 SPPL2BQ8TCT7 592 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 BLNKQ8WV28 456 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 RXFP2Q8WXD0 754 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 ASB13Q8WXK3 278 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 POP5Q969H6 163 aaKnown RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 CLDN23Q96B33 292 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 CMBLQ96DG6 245 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 GALNT14Q96FL9 552 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 OR11A1Q9GZK7 315 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 CHST5Q9GZS9 411 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 MED28Q9H204 178 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 DUSP21Q9H596 190 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF430Q9H8G1 570 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TPT1P8Q9HAU6 139 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TMEM138Q9NPI0 162 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 SMCO4Q9NRQ5 59 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 SCN3BQ9NY72 215 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 DNAJC27Q9NZQ0 273 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF629Q9UEG4 869 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-212ENST00000496458 MIA3Q5JRA6 1907 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 REV3LO60673 3130 aa3.18□□□□□ -1.9
SF3B1-212ENST00000496458 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms