RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZNF439Q8NDP4 499 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 FAM216AQ8WUB2 273 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 NUDT22Q9BRQ3 303 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 HES4Q9HCC6 221 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 WASHC3Q9Y3C0 194 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 LAMA5O15230 3695 aa7.65□□□□□ -1.18
HPS4-217ENST00000496385 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 A0A1W2PQM1 296 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 GAGE10A6NGK3 116 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 RER1O15258 196 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 TNFSF12O43508 249 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 GDF1P27539 372 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 FAM162BQ5T6X4 162 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 OOSP2Q86WS3 158 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 MMD2Q8IY49 270 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 GJC3Q8NFK1 279 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 DLL3Q9NYJ7 618 aa7.65□□□□□ -1.19
HPS4-217ENST00000496385 SHANK1Q9Y566 2161 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 A0A0G2JRQ6 117 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 ODAMA1E959 279 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 NXPH3O95157 252 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 NUDT3O95989 172 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 NPY1RP25929 384 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 GPR6P46095 362 aaPredicted RBP7.64□□□□□ -1.19
HPS4-217ENST00000496385 SUMO3P55854 103 aaPredicted RBP7.64□□□□□ -1.19
HPS4-217ENST00000496385 FOXC1Q12948 553 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 VWC2Q2TAL6 325 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 RASL11AQ6T310 242 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 NEGR1Q7Z3B1 354 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 ZNF114Q8NC26 417 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 OCC1Q8TAD7 63 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 ZNF501Q96CX3 271 aaPredicted RBP7.64□□□□□ -1.19
HPS4-217ENST00000496385 CHD8Q9HCK8 2581 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 KIR2DS5A0A0G2JLQ3 304 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 A0A0G2JNG1 304 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 KIR2DS3K7RE56 304 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 IAPPP10997 89 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 IL11P20809 199 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 GUCA1AP43080 201 aaPredicted RBP7.64□□□□□ -1.19
HPS4-217ENST00000496385 GFERP55789 205 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 CLDN17P56750 224 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 SEC11AP67812 179 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 CFHR1Q03591 330 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 MYBPHQ13203 477 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 KIR2DS5Q14953 304 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 IGFBP7Q16270 282 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 SPANXN5Q5MJ07 72 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 TMEM136Q6ZRR5 245 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 C17orf82Q86X59 251 aaPredicted RBP7.64□□□□□ -1.19
HPS4-217ENST00000496385 OR5A2Q8NGI9 324 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 RDH5Q92781 318 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 BORCS8Q96FH0 119 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 ZNF442Q9H7R0 627 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 CCL28Q9NRJ3 127 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 TMEM38BQ9NVV0 291 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 CACNG5Q9UF02 275 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 CFAP47Q6ZTR5 3102 aa7.64□□□□□ -1.19
HPS4-217ENST00000496385 DMXL2Q8TDJ6 3036 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
HPS4-217ENST00000496385 PVRP15151 417 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 ACP1P24666 158 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 FASLGP48023 281 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 UBE2G1P62253 170 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 HIST1H1AQ02539 215 aaPredicted RBP7.63□□□□□ -1.19
HPS4-217ENST00000496385 PHYHD1Q5SRE7 291 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.63□□□□□ -1.19
HPS4-217ENST00000496385 OR1B1Q8NGR6 318 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 ULBP2Q9BZM5 246 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 COMMD5Q9GZQ3 224 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 TRBV20OR9-2A0A075B6H5 130 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 IGHV1OR21-1A0A087WYE8 117 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 E9PLN8 166 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 HMGB3O15347 200 aaKnown RBP7.63□□□□□ -1.19
HPS4-217ENST00000496385 SAP30O75446 220 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 MT-CO2P00403 227 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 IGKV3-11P04433 115 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 AMY1AP04745 511 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 CRYBB3P26998 211 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 RBM11P57052 281 aaKnown RBP7.63□□□□□ -1.19
HPS4-217ENST00000496385 TGFBR3Q03167 851 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 HES3Q5TGS1 186 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 HLA-DQA1Q5Y7H0 255 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 C11orf52Q96A22 123 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 RCHY1Q96PM5 261 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 ATP6V0BQ99437 205 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 SSBP4Q9BWG4 385 aaPredicted RBP7.63□□□□□ -1.19
HPS4-217ENST00000496385 MS4A6AQ9H2W1 248 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 ZNF391Q9UJN7 358 aa7.63□□□□□ -1.19
HPS4-217ENST00000496385 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 FAM181BA6NEQ2 426 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 ANGPTL7O43827 346 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 WISP1O95388 367 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 ATP5G3P48201 142 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 DUSP3P51452 185 aaPredicted RBP7.62□□□□□ -1.19
HPS4-217ENST00000496385 PLCXD2Q0VAA5 305 aa7.62□□□□□ -1.19
HPS4-217ENST00000496385 CDCP2Q5VXM1 449 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms