RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 KRASP01116 189 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 IGHV3-43DP0DP04 118 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 NFYBP25208 207 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 SERF2P84101 59 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 ZNF816Q0VGE8 651 aaPredicted RBP17.41■□□□□ 0.38
FGFR1-223ENST00000496296 THNSL2Q86YJ6 484 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 UBTD1Q9HAC8 227 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 PKDREJQ9NTG1 2253 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 LY86O95711 162 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 FOLR2P14207 255 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 DUTP33316 252 aaKnown RBP17.41■□□□□ 0.38
FGFR1-223ENST00000496296 MRPS11P82912 194 aaKnown RBP17.41■□□□□ 0.38
FGFR1-223ENST00000496296 MEF2CQ06413 473 aaPredicted RBP17.41■□□□□ 0.38
FGFR1-223ENST00000496296 ATP6V1FQ16864 119 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 LTC4SQ16873 150 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 Q3ZCU0 254 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 CENPVQ7Z7K6 275 aaPredicted RBP17.41■□□□□ 0.38
FGFR1-223ENST00000496296 C15orf54Q8N8G6 183 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 TIMM9Q9Y5J7 89 aa17.41■□□□□ 0.38
FGFR1-223ENST00000496296 KBTBD11-OT1A0A1B0GTJ5 212 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 ZNF729A6NN14 1252 aaPredicted RBP17.4■□□□□ 0.38
FGFR1-223ENST00000496296 PROP1O75360 226 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 CCL20P78556 96 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 AVPI1Q5T686 147 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 BTNL3Q6UXE8 466 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 CORO2AQ92828 525 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 CIB3Q96Q77 187 aaPredicted RBP17.4■□□□□ 0.38
FGFR1-223ENST00000496296 WDR61Q9GZS3 305 aaKnown RBP17.4■□□□□ 0.38
FGFR1-223ENST00000496296 TUBA4BQ9H853 241 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 CLN8Q9UBY8 286 aa17.4■□□□□ 0.38
FGFR1-223ENST00000496296 A0A1W2PPR1 153 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 COLCA2A8K830 154 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 LYNX1G3V0Z9 82 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 SCAF4O95104 1147 aaKnown RBP17.39■□□□□ 0.38
FGFR1-223ENST00000496296 LYNX1P0DP58 116 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 GPR12P47775 334 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 RAB13P51153 203 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 RAB2AP61019 212 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 ZNF506Q5JVG8 444 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 SPANXN5Q5MJ07 72 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 LYPD2Q6UXB3 125 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 MBD3L1Q8WWY6 194 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 LINC00574Q9H8X3 128 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 FBXO7Q9Y3I1 522 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 LINC00312Q9Y6C7 94 aa17.39■□□□□ 0.38
FGFR1-223ENST00000496296 USP9XQ93008 2570 aaPredicted RBP17.39■□□□□ 0.38
FGFR1-223ENST00000496296 GPR37O15354 613 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 RPL31P62899 125 aaKnown RBP17.39■□□□□ 0.37
FGFR1-223ENST00000496296 C17orf58Q2M2W7 97 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 TMEM30BQ3MIR4 351 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 OR2B11Q5JQS5 317 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 H2BFWTQ7Z2G1 175 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 RXFP4Q8TDU9 374 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 TIMD4Q96H15 378 aa17.39■□□□□ 0.37
FGFR1-223ENST00000496296 LRRK2Q5S007 2527 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 PMS2P5A8MQ11 134 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 HPRT1P00492 218 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 SRSF1Q07955 248 aaKnown RBP eCLIP17.38■□□□□ 0.37
FGFR1-223ENST00000496296 SLC38A11Q08AI6 406 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 NCR3LG1Q68D85 454 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 SLC25A24Q6NUK1 477 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.38■□□□□ 0.37
FGFR1-223ENST00000496296 OR4C12Q96R67 309 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 IFI27L2Q9H2X8 130 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 GAL3ST2Q9H3Q3 398 aa17.38■□□□□ 0.37
FGFR1-223ENST00000496296 UNKLQ9H9P5 680 aaKnown RBP17.38■□□□□ 0.37
FGFR1-223ENST00000496296 DVL1O14640 695 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 DAOP14920 347 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 KIR2DS2P43631 304 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 HOXA1P49639 335 aaPredicted RBP17.37■□□□□ 0.37
FGFR1-223ENST00000496296 RAB7AP51149 207 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 LILRB2Q8N423 598 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 H1FXQ92522 213 aaKnown RBP17.37■□□□□ 0.37
FGFR1-223ENST00000496296 PINX1Q96BK5 328 aaKnown RBP17.37■□□□□ 0.37
FGFR1-223ENST00000496296 IGHV2-70P01814 119 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 HSPB1P04792 205 aaKnown RBP17.37■□□□□ 0.37
FGFR1-223ENST00000496296 CRYBA1P05813 215 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 PDLIM3Q53GG5 364 aaPredicted RBP17.37■□□□□ 0.37
FGFR1-223ENST00000496296 LINC00518Q8N0U6 118 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 OR10G4Q8NGN3 311 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 CLDND2Q8NHS1 167 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 RAB1CQ92928 201 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 RSG1Q9BU20 258 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 BIN3Q9NQY0 253 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 CTSZQ9UBR2 303 aa17.37■□□□□ 0.37
FGFR1-223ENST00000496296 SPTBN1Q01082 2364 aaKnown RBP17.37■□□□□ 0.37
FGFR1-223ENST00000496296 MARCH11A6NNE9 402 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 SRP19P09132 144 aaKnown RBP17.36■□□□□ 0.37
FGFR1-223ENST00000496296 PMS2P11Q13670 270 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 RHEBQ15382 184 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 VWC2Q2TAL6 325 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 DTD1Q8TEA8 209 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 TAF15Q92804 592 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■□□□□ 10.1
FGFR1-223ENST00000496296 R3HDM4Q96D70 268 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 RARRES2Q99969 163 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 SAV1Q9H4B6 383 aaPredicted RBP17.36■□□□□ 0.37
FGFR1-223ENST00000496296 RPRMQ9NS64 109 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 GFOD1Q9NXC2 390 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 IDI2-AS1Q9NZ38 188 aa17.36■□□□□ 0.37
FGFR1-223ENST00000496296 ICAM4Q14773 271 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms