RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 MMP23AO75900 390 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 SPP1P10451 314 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 ECI1P42126 302 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 LPAR6P43657 344 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 OR3A4PP47883 348 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 RBP2P50120 134 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 SULT1A2P50226 295 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 MTCP1P56278 107 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 MEF2CQ06413 473 aaPredicted RBP8.74□□□□□ -1.01
RNF220-217ENST00000496262 SURF2Q15527 256 aaPredicted RBP8.74□□□□□ -1.01
RNF220-217ENST00000496262 HMGN3Q15651 99 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 REC114Q7Z4M0 266 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 LHFPL1Q86WI0 220 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 Q8IYB0 196 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 FAM58AQ8N1B3 248 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 C15orf54Q8N8G6 183 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 CPNE2Q96FN4 548 aaPredicted RBP8.74□□□□□ -1.01
RNF220-217ENST00000496262 TMEM133Q9H2Q1 129 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.74□□□□□ -1.01
RNF220-217ENST00000496262 PARP11Q9NR21 331 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 SMCO4Q9NRQ5 59 aa8.74□□□□□ -1.01
RNF220-217ENST00000496262 IGKV1-9A0A0C4DH69 117 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 SH2D7A6NKC9 451 aaPredicted RBP8.73□□□□□ -1.01
RNF220-217ENST00000496262 GAPDHP04406 335 aaKnown RBP8.73□□□□□ -1.01
RNF220-217ENST00000496262 PF4V1P10720 104 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 CD33P20138 364 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 HTR1DP28221 377 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 OR3A1P47881 315 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 F2RL1P55085 397 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 SUPT4H1P63272 117 aaKnown RBP8.73□□□□□ -1.01
RNF220-217ENST00000496262 RAB32Q13637 225 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 ARL6IP1Q15041 203 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 KHDC1LQ5JSQ8 128 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 PLAC9Q5JTB6 97 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 MINOS1Q5TGZ0 78 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 TMEM268Q5VZI3 342 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 TMEM104Q8NE00 496 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 OR5AU1Q8NGC0 362 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 OR5D18Q8NGL1 313 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 OR4P4Q8NGL7 312 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 SFT2D1Q8WV19 159 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 PP6455Q8WZ26 134 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 SPACA5Q96QH8 159 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 GPER1Q99527 375 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 RTBDNQ9BSG5 229 aaPredicted RBP8.73□□□□□ -1.01
RNF220-217ENST00000496262 WNT10AQ9GZT5 417 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 BANF2Q9H503 90 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 TAF9BQ9HBM6 251 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 NECAP2Q9NVZ3 263 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 AURKAIP1Q9NWT8 199 aaPredicted RBP8.73□□□□□ -1.01
RNF220-217ENST00000496262 EHFQ9NZC4 300 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 MINOS1-NBL1R4GNA1 71 aa8.73□□□□□ -1.01
RNF220-217ENST00000496262 TRGV10A0A0A0MS01 117 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 C1orf196B1AJZ1 125 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 MGST3O14880 152 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 CA11O75493 328 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 HTR3BO95264 441 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 OR2H2O95918 312 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 S100A8P05109 93 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 SMIM6P0DI80 62 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 IGLL1P15814 213 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 PI3P19957 117 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 NFYBP25208 207 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 DYNLT3P51808 116 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 LOXL3P58215 753 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 RBM39Q14498 530 aaKnown RBP8.72□□□□□ -1.01
RNF220-217ENST00000496262 C9orf152Q5JTZ5 239 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 SPIN3Q5JUX0 258 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 RPL7L1Q6DKI1 246 aaKnown RBP8.72□□□□□ -1.01
RNF220-217ENST00000496262 RNF144BQ7Z419 303 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
RNF220-217ENST00000496262 ABHD12Q8N2K0 398 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 COMMD1Q8N668 190 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 CCDC54Q8NEL0 328 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 OR51T1Q8NGJ9 327 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 WIPF2Q8TF74 440 aaPredicted RBP8.72□□□□□ -1.01
RNF220-217ENST00000496262 ARHGAP5-AS1Q96IT6 56 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 OR10C1Q96KK4 312 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
RNF220-217ENST00000496262 GAL3ST2Q9H3Q3 398 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 PRR13Q9NZ81 148 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
RNF220-217ENST00000496262 PLXNB1O43157 2135 aa8.71□□□□□ -1.01
RNF220-217ENST00000496262 IGKV1-12A0A0C4DH73 117 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 TCRBV4S1A1TA0A5B7 111 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 K7EPK0 472 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 SH2D1BO14796 132 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 IFNA21P01568 189 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 IGKV1D-12P01611 117 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 PF4P02776 101 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 CD5P06127 495 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 HOXB5P09067 269 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 ZNF44P15621 663 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 RCC1P18754 421 aaPredicted RBP8.71□□□□□ -1.02
RNF220-217ENST00000496262 RPL12P30050 165 aaKnown RBP8.71□□□□□ -1.02
RNF220-217ENST00000496262 GLIPR1P48060 266 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 KCNJ3P48549 501 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 AESQ08117 197 aa8.71□□□□□ -1.02
RNF220-217ENST00000496262 IL15RAQ13261 267 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms