RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	APELA	P0DMC3	54 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	RPA2	P15927	270 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	CHRNA7	P36544	502 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	KIR2DS2	P43631	304 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	BRWD1-AS2	P59051	145 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	TAS2R19	P59542	299 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	MRPS10	P82664	201 aa	Known RBP	7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	CATR1	Q13166	79 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	MSMO1	Q15800	293 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	TNXA	Q16473	311 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	SCGB2B2	Q4G0G5	96 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	PYDC2	Q56P42	97 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	CXorf66	Q5JRM2	361 aa	Predicted RBP	7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	VAX1	Q5SQQ9	334 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	FAAP20	Q6NZ36	180 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	STEAP1B	Q6NZ63	245 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	UNQ5815/PRO19632	Q6UWF5	114 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	ZNF562	Q6V9R5	426 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	CMTM1	Q8IZ96	169 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	COMMD1	Q8N668	190 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	TMEM229B	Q8NBD8	167 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	LFNG	Q8NES3	379 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	OR4F17	Q8NGA8	305 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	OR4D10	Q8NGI6	311 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	ARPC1A	Q92747	370 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	BORCS5	Q969J3	196 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	OR4F4	Q96R69	305 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	PGLYRP1	O75594	196 aa	Predicted RBP	7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	IGHG4	P01861	327 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	EGR2	P11161	476 aa	Predicted RBP	7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	PI3	P19957	117 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	PPP5C	P53041	499 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	UBE2K	P61086	200 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	RPL23A	P62750	156 aa	Known RBP	7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	CFHR3	Q02985	330 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	TMEM267	Q0VDI3	215 aa	Predicted RBP	7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	FOXE3	Q13461	319 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	PRSS8	Q16651	343 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	FOXB2	Q5VYV0	432 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	TMEM65	Q6PI78	240 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	C8orf86	Q6ZUL3	223 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	TEX45	Q8NA69	505 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	POC5	Q8NA72	575 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	KLHL30-AS1	Q8NEE0	82 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	DGCR14	Q96DF8	476 aa	Known RBP	7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	RHOV	Q96L33	236 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	SOST	Q9BQB4	213 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	KLK15	Q9H2R5	256 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	NDUFA13	Q9P0J0	144 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	RABL2A	Q9UBK7	228 aa	Predicted RBP	7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	RABL2B	Q9UNT1	228 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	NUBP2	Q9Y5Y2	271 aa		7.69	□□□□□ -1.18
CALD1-223	ENST00000496024	CTDSPL	O15194	276 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	SOX15	O60248	233 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	ACTL6B	O94805	426 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	OR2A4	O95047	310 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	S1PR2	O95136	353 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	HRAS	P01112	189 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	PF4	P02776	101 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	CD74	P04233	296 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	ELANE	P08246	267 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	TBP	P20226	339 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	S100G	P29377	79 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	PPIF	P30405	207 aa	Known RBP	7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	SSBP2	P81877	361 aa	Predicted RBP	7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	SSBP1	Q04837	148 aa	Known RBP	7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	C10orf55	Q5SWW7	151 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	LPCAT3	Q6P1A2	487 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	TBC1D26	Q86UD7	250 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	OR5T1	Q8NG75	326 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	OR4C16	Q8NGL9	310 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	MS4A10	Q96PG2	267 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	DUX3	Q96PT4	197 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	OR5B12	Q96R08	314 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	OR2A7	Q96R45	310 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	PHB2	Q99623	299 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	RSRP1	Q9BUV0	290 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	ZNF430	Q9H8G1	570 aa	Predicted RBP	7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	HRASLS	Q9HDD0	168 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	ZNF355P	Q9NSJ1	428 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	ZFP57	Q9NU63	452 aa		7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	FOXA2	Q9Y261	457 aa	Predicted RBP	7.68	□□□□□ -1.18
CALD1-223	ENST00000496024	MSGN1	A6NI15	193 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	DISC1	C4P0D8	188 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	MPPED1	O15442	326 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	GSTZ1	O43708	216 aa	Predicted RBP	7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	IGLV1-40	P01703	118 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	ZNF735	P0CB33	412 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	AKAIN1	P0CW23	69 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	MYOD1	P15172	320 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	F2R	P25116	425 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	PSMB8	P28062	276 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	LPAR6	P43657	344 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	CRIP2	P52943	208 aa	Predicted RBP	7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	UCP3	P55916	312 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	MEF2D	Q14814	521 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	MRGPRG-AS1	Q2M3A8	158 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	DEFB136	Q30KP8	78 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	AKIRIN2	Q53H80	203 aa		7.67	□□□□□ -1.18
CALD1-223	ENST00000496024	C19orf54	Q5BKX5	351 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms