RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 MUC3AQ02505 3323 aa7.1□□□□□ -1.27
EPHA4-213ENST00000495693 WDR87Q6ZQQ6 2873 aa7.1□□□□□ -1.27
EPHA4-213ENST00000495693 INTS1Q8N201 2190 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 GTF3C1Q12789 2109 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 IGHV3-43A0A0B4J1X8 118 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 C17orf98A8MV24 154 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 H7C2Y5 167 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 CCL21O00585 134 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RAMP3O60896 148 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 TMEM50AO95807 157 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 CYB5R3P00387 301 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 GYPAP02724 150 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RBP4P02753 201 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 METTL15P1P0C7V9 234 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 IGHV3-43DP0DP04 118 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 PPOXP50336 477 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RAB13P51153 203 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RPL30P62888 115 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RPL31P62899 125 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 CCL8P80075 99 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 TMEM267Q0VDI3 215 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RAB31Q13636 194 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 ZNF273Q14593 569 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 NCR3LG1Q68D85 454 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 ADAM5Q6NVV9 412 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 BTNL3Q6UXE8 466 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 RBMS3Q6XE24 437 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 Q6ZRM9 215 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 SLC25A48Q6ZT89 311 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 C5orf24Q7Z6I8 188 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 THNSL2Q86YJ6 484 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 LINC00311Q8N616 119 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 SYT8Q8NBV8 401 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 CLRN3Q8NCR9 226 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 UBALD1Q8TB05 177 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 TAF15Q92804 592 aaKnown RBP eCLIP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 WFIKKN1Q96NZ8 548 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 CCL13Q99616 98 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 SH3BGRL3Q9H299 93 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 ZNF257Q9Y2Q1 563 aa7.09□□□□□ -1.27
EPHA4-213ENST00000495693 TMA7Q9Y2S6 64 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 CHD3Q12873 2000 aaKnown RBP7.09□□□□□ -1.27
EPHA4-213ENST00000495693 VPS13AQ96RL7 3174 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 SHANK1Q9Y566 2161 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 SAA2-SAA4A0A096LPE2 208 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 IGHV1-69-2A0A0G2JMI3 117 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 TMEM8BA6NDV4 472 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 RBFOX3A6NFN3 312 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 C15orf61A6NNL5 157 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 LINC00473A8K010 186 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 DEFB108AA8MXU0 73 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 SHISA9B4DS77 424 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 H3BP45 60 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 TSPAN4O14817 238 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 NXPH3O95157 252 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 SAA2P0DJI9 122 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-213ENST00000495693 LTC4SQ16873 150 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 OR2B11Q5JQS5 317 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 SOHLH1Q5JUK2 328 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 CLEC9AQ6UXN8 241 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 PDPNQ86YL7 162 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 LYG1Q8N1E2 194 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 CA5BP1Q8WTZ4 195 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 DDB2Q92466 427 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 BSCL2Q96G97 398 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-213ENST00000495693 PCGF1Q9BSM1 259 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 SMCO4Q9NRQ5 59 aa7.08□□□□□ -1.28
EPHA4-213ENST00000495693 FOXA2Q9Y261 457 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-213ENST00000495693 DMDP11532 3685 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 UBE2L5PA0A1B0GUS4 154 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 B4DEV8 164 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 AGPAT2O15120 278 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 CYB5BO43169 146 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 SCO1O75880 301 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 IFNA10P01566 189 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ARG1P05089 322 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 NFYBP25208 207 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 MC5RP33032 325 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 HOXA1P49639 335 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 DLK1P80370 383 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 PNRC1Q12796 327 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ACOT6Q3I5F7 207 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ODF3L1Q8IXM7 274 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 FAM216BQ8N7L0 139 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 C15orf54Q8N8G6 183 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF439Q8NDP4 499 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 DEFB108BQ8NET1 73 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF596Q8TC21 504 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms