RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SLC25A38Q96DW6 304 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 THAP7Q9BT49 309 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 ST6GALNAC5Q9BVH7 336 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 RANGRFQ9HD47 186 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 AKIP1Q9NQ31 210 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 GAR1Q9NY12 217 aaKnown RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 DAPK2Q9UIK4 370 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 STUB1Q9UNE7 303 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 RBM7Q9Y580 266 aaKnown RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 HYDINQ4G0P3 5121 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 E7EUB6 86 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 BMPR1BO00238 502 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 FCGR3BO75015 233 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 BRI3O95415 125 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 TALDO1P37837 337 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 VMA21Q3ZAQ7 101 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 ADAMTSL5Q6ZMM2 481 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 KCTD9Q7L273 389 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 TEX45Q8NA69 505 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 OR9G4Q8NGQ1 327 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 ACOT12Q8WYK0 555 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 PHB2Q99623 299 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 RBMX2Q9Y388 322 aaKnown RBP8.86□□□□□ -0.99
VTI1A-208ENST00000494728 RRP15Q9Y3B9 282 aaKnown RBP8.86□□□□□ -0.99
VTI1A-208ENST00000494728 OR2W1Q9Y3N9 320 aa8.86□□□□□ -0.99
VTI1A-208ENST00000494728 A0A0G2JLM5 398 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 TEX22C9J3V5 150 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 MRPS14O60783 128 aaKnown RBP8.85□□□□□ -0.99
VTI1A-208ENST00000494728 HLA-DQB1P01920 261 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 CSN3P07498 182 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 OR9G9P0C7N8 305 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 RRASP10301 218 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 MYOD1P15172 320 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 ZP3P21754 424 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 SDC2P34741 201 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 RHOGP84095 191 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 MXD1Q05195 221 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 CBX3Q13185 183 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
VTI1A-208ENST00000494728 CDK10Q15131 360 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 CASC10Q5T4H9 136 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 ANKRD13BQ86YJ7 626 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 GVQW1Q8N7I0 195 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 OSR1Q8TAX0 266 aaPredicted RBP8.85□□□□□ -0.99
VTI1A-208ENST00000494728 MUC7Q8TAX7 377 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 ADTRPQ96IZ2 230 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 ELOVL1Q9BW60 279 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 C19orf73Q9NVV2 129 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 RHBDL2Q9NX52 303 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 PEF1Q9UBV8 284 aaKnown RBP8.85□□□□□ -0.99
VTI1A-208ENST00000494728 ANXA10Q9UJ72 324 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 DMRT1Q9Y5R6 373 aa8.85□□□□□ -0.99
VTI1A-208ENST00000494728 TRBV9A0A0B4J1U6 114 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 HMX3A6NHT5 357 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 C3orf84H3BNL1 204 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 TUSC2O75896 110 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 FCER2P06734 321 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 AADACP22760 399 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 TGFBR1P36897 503 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 RANBP1P43487 201 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 TMEM68Q96MH6 324 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 CENPOQ9BU64 300 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 DCSTAMPQ9H295 470 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 TAS2R8Q9NYW2 309 aa8.84□□□□□ -0.99
VTI1A-208ENST00000494728 CGB1A6NKQ9 187 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 PPP5D1E7EU14 171 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 MPPED1O15442 326 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 TNFSF12O43508 249 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 HLA-AP01891 365 aaKnown RBP8.83□□□□□ -1
VTI1A-208ENST00000494728 IL6RP08887 468 aaPredicted RBP8.83□□□□□ -1
VTI1A-208ENST00000494728 GNG2P59768 71 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 CNIH2Q6PI25 160 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 ZNF773Q6PK81 442 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 SNAPC3Q92966 411 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 USMG5Q96IX5 58 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 SPATA2Q9UM82 520 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 SELENOKQ9Y6D0 94 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 S4R3C0 116 aa8.83□□□□□ -1
VTI1A-208ENST00000494728 LOC100506127A0A0U1RQW1 187 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 A8MZ25 164 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 OR2J3O76001 311 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 KBTBD11O94819 623 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 OR2A4O95047 310 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 AREGP15514 252 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 CD36P16671 472 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
VTI1A-208ENST00000494728 ARL6IP1Q15041 203 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 RPEL1Q2QD12 228 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 SSX9Q7RTT3 188 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 TPRA1Q86W33 373 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 MMD2Q8IY49 270 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 PUSL1Q8N0Z8 303 aaKnown RBP8.82□□□□□ -1
VTI1A-208ENST00000494728 TTC9CQ8N5M4 171 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 TCTEX1D2Q8WW35 142 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 FCGR1BQ92637 280 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 CCDC140Q96MF4 163 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 DCUN1D5Q9BTE7 237 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 WFDC10AQ9H1F0 79 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms