RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 AKR1C4P17516 323 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 GNRHRP30968 328 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 VDAC2P45880 294 aaPredicted RBP9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 ARHGDIBP52566 201 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 ZNF137PP52743 207 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 LGALS4P56470 323 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 RAB25P57735 213 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 TAGLNQ01995 201 aaKnown RBP9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 DHODHQ02127 395 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 CD69Q07108 199 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 CBX3Q13185 183 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 PHLDA2Q53GA4 152 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 ZNF626Q68DY1 528 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 DRAM1Q8N682 238 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 GALNT14Q96FL9 552 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 WWC2-AS2Q96NR7 200 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 RTBDNQ9BSG5 229 aaPredicted RBP9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 PRSS22Q9GZN4 317 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 CCL28Q9NRJ3 127 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
CSNK1E-212ENST00000494610 CSMD3Q7Z407 3707 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 A0A0B4J2A0 478 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 DUXBA0A1W2PPF3 345 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 VGLL3A8MV65 326 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 OOSP1A8MZH6 123 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 H0Y980 276 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 MPPED1O15442 326 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 SSNA1O43805 119 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 MMP23AO75900 390 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 ATG12O94817 140 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 SFT2D2O95562 160 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 DUS4LO95620 317 aaKnown RBP9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 RPA2P15927 270 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 THBS3P49746 956 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 DHRS2Q13268 280 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 HLA-DRB5Q30154 266 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 CT45A1Q5HYN5 189 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 MINOS1Q5TGZ0 78 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 OR11H6Q8NGC7 330 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 CT45A3Q8NHU0 189 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 AGMATQ9BSE5 352 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 OR51J1Q9H342 316 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 SHPKQ9UHJ6 478 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 ALG5Q9Y673 324 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 MINOS1-NBL1R4GNA1 71 aa9.33□□□□□ -0.92
CSNK1E-212ENST00000494610 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 SAA2-SAA4A0A096LPE2 208 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 C3orf85A0A1B0GTC6 90 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 TCRBV4S1A1TA0A5B7 111 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 C9orf170A2RU37 121 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 APOA2P02652 100 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 PF4P02776 101 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 SAA2P0DJI9 122 aaPredicted RBP9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 RRASP10301 218 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 PI3P19957 117 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 F2RP25116 425 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 CCDC144NLQ6NUI1 221 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 C5orf24Q7Z6I8 188 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 TBC1D26Q86UD7 250 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 ADAD2Q8NCV1 583 aaKnown RBP9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 TCTEX1D2Q8WW35 142 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 ASB13Q8WXK3 278 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 IL22RA2Q969J5 263 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 PARP12Q9H0J9 701 aaKnown RBP9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 MED28Q9H204 178 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 SDHAF2Q9NX18 166 aa9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 TBL2Q9Y4P3 447 aaKnown RBP9.32□□□□□ -0.92
CSNK1E-212ENST00000494610 LEUTXA8MZ59 168 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 M0R1X1 148 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 PGLYRP1O75594 196 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 IGLV1-47P01700 117 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 SERPINE2P07093 398 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 HTR1DP28221 377 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 RTL8BQ17RB0 113 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 LIN54Q6MZP7 749 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 ZNF833PQ6ZTB9 187 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 CENPVQ7Z7K6 275 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 LGI3Q8N145 548 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 C12orf45Q8N5I9 185 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 OR51H1Q8NH63 302 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 OR4S2Q8NH73 311 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 CASTOR1Q8WTX7 329 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 LEAP2Q969E1 77 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 RPEQ96AT9 228 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 ABHD14BQ96IU4 210 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 AIFM2Q9BRQ8 373 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 TMEM222Q9H0R3 208 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms