RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ADARB2-AS1A8MUL3 147 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 G3V318 75 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 M0QZ24 198 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 ARPC1BO15143 372 aaKnown RBP10.63□□□□□ -0.71
COL1A1-208ENST00000494334 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL1A1-208ENST00000494334 RLN1P04808 185 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
COL1A1-208ENST00000494334 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
COL1A1-208ENST00000494334 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
COL1A1-208ENST00000494334 FXYD3Q14802 87 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 SCGB2B2Q4G0G5 96 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 PHLDA2Q53GA4 152 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 SPANXN2Q5MJ10 180 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 PRR31Q5SQ13 230 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 NDUFA11Q86Y39 141 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 COMMD1Q8N668 190 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
COL1A1-208ENST00000494334 NUBP2Q9Y5Y2 271 aa10.63□□□□□ -0.71
COL1A1-208ENST00000494334 TCRBV4S1A1TA0A5B7 111 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 DISC1C4P0D8 188 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 HPRT1P00492 218 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-208ENST00000494334 PRSS8Q16651 343 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 PUSL1Q8N0Z8 303 aaKnown RBP10.62□□□□□ -0.71
COL1A1-208ENST00000494334 POC5Q8NA72 575 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 CD300LFQ8TDQ1 290 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 TRIM63Q969Q1 353 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 MRGPRFQ96AM1 343 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 SRRQ9GZT4 340 aa10.62□□□□□ -0.71
COL1A1-208ENST00000494334 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-208ENST00000494334 TRAV41A0A0B4J266 112 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 CNIH1O95406 144 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 HRASP01112 189 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 IGHG4P01861 327 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 OPN1MWP04001 364 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ELANEP08246 267 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 PGAM2P15259 253 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 PI3P19957 117 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 F2RP25116 425 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 S100GP29377 79 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 PPP5CP53041 499 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 GNB1P62873 340 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 KLF9Q13886 244 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ECSCRQ19T08 205 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 C2orf68Q2NKX9 166 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 CNPY1Q3B7I2 92 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ZNF585BQ52M93 769 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 C19orf54Q5BKX5 351 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 SSX9Q7RTT3 188 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 TBC1D26Q86UD7 250 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 MINDY2Q8NBR6 621 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 MARCH1Q8TCQ1 289 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ABHD5Q8WTS1 349 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ZNF486Q96H40 463 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-208ENST00000494334 RHOVQ96L33 236 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 ZNF430Q9H8G1 570 aaPredicted RBP10.61□□□□□ -0.71
COL1A1-208ENST00000494334 PLEKHA2Q9HB19 425 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 SLC2A9Q9NRM0 540 aa10.61□□□□□ -0.71
COL1A1-208ENST00000494334 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 OR2A4O95047 310 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 S1PR2O95136 353 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 TSPAN15O95858 294 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 NQO2P16083 231 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 LPAR6P43657 344 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 TAS2R31P59538 309 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 RND3P61587 244 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 TMEM267Q0VDI3 215 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-208ENST00000494334 FOXE3Q13461 319 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 AKIRIN2Q53H80 203 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 TOMM5Q8N4H5 51 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 TCTEX1D1Q8N7M0 179 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 LFNGQ8NES3 379 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 OR51S1Q8NGJ8 323 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 OR13C8Q8NGS7 320 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 GRPEL2Q8TAA5 225 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 ZFAND1Q8TCF1 268 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 OR2A7Q96R45 310 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 SDHCQ99643 169 aaPredicted RBP10.6□□□□□ -0.71
COL1A1-208ENST00000494334 AIFM2Q9BRQ8 373 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 HRASLSQ9HDD0 168 aa10.6□□□□□ -0.71
COL1A1-208ENST00000494334 A0A1W2PN81 502 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 MPPED1O15442 326 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 SOX15O60248 233 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 KBTBD11O94819 623 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
COL1A1-208ENST00000494334 CTSDP07339 412 aaPredicted RBP10.59□□□□□ -0.71
COL1A1-208ENST00000494334 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
COL1A1-208ENST00000494334 PSMB8P28062 276 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms