RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SLC16A4O15374 487 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 DENRO43583 198 aaKnown RBP3.24□□□□□ -1.89
SMC2-205ENST00000493955 E2F6O75461 281 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 APOEP02649 317 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 C8orf88P0DMB2 117 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 ZNF708P17019 499 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 ORM2P19652 201 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 MIPP30301 263 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 BLVRAP53004 296 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 APOFQ13790 326 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 ZNF141Q15928 474 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 EIF4E3Q8N5X7 224 aaKnown RBP3.24□□□□□ -1.89
SMC2-205ENST00000493955 NATD1Q8N6N6 113 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 ERMNQ8TAM6 284 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 OR7D2Q96RA2 312 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 MYH8P13535 1937 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 NAV1Q8NEY1 1877 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 PLXNA1Q9UIW2 1896 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 IGKV1D-37A0A075B6S9 117 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 H0Y980 276 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 COPEO14579 308 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 ACTBP60709 375 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 ACTG1P63261 375 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 DEFA6Q01524 100 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 TSPAN31Q12999 210 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 MLLT11Q13015 90 aaPredicted RBP3.23□□□□□ -1.89
SMC2-205ENST00000493955 BAMBIQ13145 260 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 PDGFRLQ15198 375 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 DEFB134Q4QY38 66 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 TLCD1Q96CP7 247 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 ACY3Q96HD9 319 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 MED18Q9BUE0 208 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 EIF5A2Q9GZV4 153 aaKnown RBP3.23□□□□□ -1.89
SMC2-205ENST00000493955 UBAP1Q9NZ09 502 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 WASHC3Q9Y3C0 194 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 ZBED9Q6R2W3 1325 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 NID2Q14112 1375 aa3.23□□□□□ -1.89
SMC2-205ENST00000493955 RANBP2P49792 3224 aaKnown RBP3.23□□□□□ -1.89
SMC2-205ENST00000493955 LECT2O14960 151 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 CPSF4O95639 269 aaKnown RBP3.22□□□□□ -1.89
SMC2-205ENST00000493955 TYMSP04818 313 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 CRYBA1P05813 215 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 OR13C7P0DN81 318 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 PDK2Q15119 407 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 OR8G1Q15617 311 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 PYCR3Q53H96 274 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 DEFB123Q8N688 67 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 LINC00304Q8N9R0 145 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 RTBDNQ9BSG5 229 aaPredicted RBP3.22□□□□□ -1.89
SMC2-205ENST00000493955 TIPINQ9BVW5 301 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 OR51B6Q9H340 312 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 FGFR1OP2Q9NVK5 253 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 OR51B4Q9Y5P0 310 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 ZNF236Q9UL36 1845 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 MCM3APO60318 1980 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 EYSQ5T1H1 3165 aa3.22□□□□□ -1.89
SMC2-205ENST00000493955 LAMA3Q16787 3333 aa3.21□□□□□ -1.89
SMC2-205ENST00000493955 LRRC37A2A6NM11 1700 aa3.21□□□□□ -1.89
SMC2-205ENST00000493955 M0QZ92 97 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 ATP5G1P05496 136 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 OR1E2P47887 323 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 MAGOHP61326 146 aaKnown RBP3.21□□□□□ -1.9
SMC2-205ENST00000493955 HPCAP84074 193 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 BSPH1Q075Z2 132 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 CCDC122Q5T0U0 273 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 LCN8Q6JVE9 175 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 SLC25A44Q96H78 314 aaPredicted RBP3.21□□□□□ -1.9
SMC2-205ENST00000493955 ABHD14BQ96IU4 210 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 TM2D3Q9BRN9 247 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 SPZ1Q9BXG8 430 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 GNB1LQ9BYB4 327 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 DERL2Q9GZP9 239 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 FIS1Q9Y3D6 152 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 POLR3HQ9Y535 204 aaPredicted RBP3.21□□□□□ -1.9
SMC2-205ENST00000493955 PTPRSQ13332 1948 aa3.21□□□□□ -1.9
SMC2-205ENST00000493955 COL4A4P53420 1690 aaPredicted RBP3.21□□□□□ -1.9
SMC2-205ENST00000493955 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 TEX50A0A1B0GTY4 177 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 SLC25A20O43772 301 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 STK16O75716 305 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 CRTAPO75718 401 aaPredicted RBP3.2□□□□□ -1.9
SMC2-205ENST00000493955 OPN1SWP03999 348 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 OR12D1P0DN82 309 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 HSPA9P38646 679 aaKnown RBP3.2□□□□□ -1.9
SMC2-205ENST00000493955 ANP32AP39687 249 aaKnown RBP3.2□□□□□ -1.9
SMC2-205ENST00000493955 IHHQ14623 411 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 OGFRL1Q5TC84 451 aaPredicted RBP3.2□□□□□ -1.9
SMC2-205ENST00000493955 CALHM3Q86XJ0 350 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 LYPD6Q86Y78 171 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 HS3ST5Q8IZT8 346 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 Q8NAQ8 132 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 IGF2BP2-AS1Q96M15 143 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 CDCA4Q9BXL8 241 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 MED28Q9H204 178 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 DNAJC12Q9UKB3 198 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 LCTP09848 1927 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 DSCAML1Q8TD84 2053 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 SDK2Q58EX2 2172 aa3.2□□□□□ -1.9
SMC2-205ENST00000493955 UNC80Q8N2C7 3258 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms