RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 VDAC2P45880 294 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 SURF2Q15527 256 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 ZNF585BQ52M93 769 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 SSX9Q7RTT3 188 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 NOL4LQ96MY1 436 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 SAA1P0DJI8 122 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 RND3P61587 244 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 IFITM3Q01628 133 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 SP6Q3SY56 376 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 SLC35E3Q7Z769 313 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 TP53RKQ96S44 253 aa14.14□□□□□ -0.15
PDLIM7-208ENST00000493815 RBFOX2O43251 390 aaKnown RBP eCLIP14.13□□□□□ -0.151e-6■■■■□ 23.2
PDLIM7-208ENST00000493815 SPDEFO95238 335 aa14.13□□□□□ -0.15
PDLIM7-208ENST00000493815 CRYGBP07316 175 aa14.13□□□□□ -0.15
PDLIM7-208ENST00000493815 LPAR6P43657 344 aa14.13□□□□□ -0.15
PDLIM7-208ENST00000493815 SRSF4Q08170 494 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-208ENST00000493815 HIST2H2BDQ6DRA6 164 aa14.13□□□□□ -0.15
PDLIM7-208ENST00000493815 TMED4Q7Z7H5 227 aa14.13□□□□□ -0.15
PDLIM7-208ENST00000493815 STAB1Q9NY15 2570 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 IGHV7-81A0A0B4J1V7 117 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 CENPXA8MT69 81 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 LYRM1O43325 122 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 UPK1BO75841 260 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 HPRT1P00492 218 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 CA2P00918 260 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 IGHG2P01859 326 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 HLA-DRB1P01911 266 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 AKR1C4P17516 323 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 COMPP49747 757 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 PROK1P58294 105 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 UBE2KP61086 200 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 GNB1P62873 340 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 NDPQ00604 133 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 VMA21Q3ZAQ7 101 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 CCDC71LQ8N9Z2 235 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 CD300LFQ8TDQ1 290 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 TMEM230Q96A57 120 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 RHOVQ96L33 236 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 TBC1D24Q9ULP9 559 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 MMP24Q9Y5R2 645 aa14.12□□□□□ -0.15
PDLIM7-208ENST00000493815 TEX13DA0A0J9YY54 714 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 C3orf85A0A1B0GTC6 90 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 NAP1L6A6NFF2 107 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 PLXNB1O43157 2135 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 CX3CL1P78423 397 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 MRGPRG-AS1Q2M3A8 158 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 C12orf54Q6X4T0 127 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 PPP1R27Q86WC6 154 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 KLHDC1Q8N7A1 406 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 PLEKHA2Q9HB19 425 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 FLVCR2Q9UPI3 526 aa14.11□□□□□ -0.15
PDLIM7-208ENST00000493815 HRASP01112 189 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 KRASP01116 189 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 KRTAP10-3P60369 221 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 C10orf99Q6UWK7 81 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 SCGB3A2Q96PL1 93 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 SLC25A21Q9BQT8 299 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 FAM103A1Q9BTL3 118 aaKnown RBP14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 PARP11Q9NR21 331 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 A0A1B0GUS0 222 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 CRYM-AS1A6NIL9 109 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 H0Y980 276 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 SERPINE2P07093 398 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 OR5AC1P0C628 307 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 NQO2P16083 231 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 G6PCP35575 357 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 TAS2R31P59538 309 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 SSBP2P81877 361 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 RBMS2Q15434 407 aaKnown RBP14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 C11orf44Q8N8P7 122 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 TEX45Q8NA69 505 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 DMBX1Q8NFW5 382 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 WFDC12Q8WWY7 111 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 R3HDM4Q96D70 268 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 C7orf50Q9BRJ6 194 aaKnown RBP14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 OR51J1Q9H342 316 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 NAA60Q9H7X0 242 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 PRR13Q9NZ81 148 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 FBXO7Q9Y3I1 522 aa14.1□□□□□ -0.15
PDLIM7-208ENST00000493815 ARPC1BO15143 372 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 ATP6V0E1O15342 81 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 OR2A4O95047 310 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 NDUFB6O95139 128 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 PRSS8Q16651 343 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 OR4A47Q6IF82 309 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 ZNF329Q86UD4 541 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 PUSL1Q8N0Z8 303 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 C3orf56Q8N813 242 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 ABHD5Q8WTS1 349 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 OR2A7Q96R45 310 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 WNT10AQ9GZT5 417 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 ZNF430Q9H8G1 570 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 WSB1Q9Y6I7 421 aa14.09□□□□□ -0.15
PDLIM7-208ENST00000493815 TRAV3A0A0B4J244 114 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 MARCH11A6NNE9 402 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 KBTBD11O94819 623 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 FXYD3Q14802 87 aa14.08□□□□□ -0.16
PDLIM7-208ENST00000493815 CENPVQ7Z7K6 275 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms