RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 STUMQ69YW2 141 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 ACSM6Q6P461 480 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 VHLLQ6RSH7 139 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 DDB2Q92466 427 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 RAB24Q969Q5 203 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 SMIM7Q9BQ49 75 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 HEATR1Q9H583 2144 aaKnown RBP7.99□□□□□ -1.13
NPHP3-209ENST00000493732 ENY2Q9NPA8 101 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 GTF3C1Q12789 2109 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 CHD3Q12873 2000 aaKnown RBP7.98□□□□□ -1.13
NPHP3-209ENST00000493732 A0A1W2PPV4 95 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 hADV38S2A0JD32 116 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 FNDC10F2Z333 226 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 C16orf97H3BN30 126 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 PDE6DO43924 150 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 PROP1O75360 226 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
NPHP3-209ENST00000493732 VENTXO95231 258 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 IGHV1-46P01743 117 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 OPRK1P41145 380 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 NBL1P41271 181 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-209ENST00000493732 RELBQ01201 579 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 MEF2CQ06413 473 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-209ENST00000493732 RAB31Q13636 194 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 KIAA0141Q14154 515 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-209ENST00000493732 POU2AF1Q16633 256 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF674Q2M3X9 581 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 TEX36Q5VZQ5 186 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 FAM53AQ6NSI3 398 aaPredicted RBP7.98□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF788Q6ZQV5 615 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 SSX7Q7RTT5 188 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 TMEM140Q9NV12 185 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 IDI2-AS1Q9NZ38 188 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 CACNA1DQ01668 2161 aa7.98□□□□□ -1.13
NPHP3-209ENST00000493732 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 C15orf61A6NNL5 157 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 IGKV1D-33P01593 117 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 IGKV1-33P01594 117 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 S100PP25815 95 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 VDAC2P45880 294 aaPredicted RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 CD81P60033 236 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 HSPE1P61604 102 aaKnown RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 MRPS11P82912 194 aaKnown RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 TCF15Q12870 199 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 C17orf58Q2M2W7 97 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 CISD2Q8N5K1 135 aaKnown RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 NANPQ8TBE9 248 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 Q8WTZ3 238 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 NEIL1Q96FI4 390 aaPredicted RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 GAL3ST2Q9H3Q3 398 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 TMPRSS5Q9H3S3 457 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 SLC25A22Q9H936 323 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 FKBP11Q9NYL4 201 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 PRNDQ9UKY0 176 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 FOXA2Q9Y261 457 aaPredicted RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 USF3Q68DE3 2245 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 WDFY4Q6ZS81 3184 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF318Q5VUA4 2279 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 TRAV38-1A0A0B4J264 116 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 GFRA3O60609 400 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 BMP5P22003 454 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF134P52741 427 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 HOXA4Q00056 320 aaPredicted RBP7.97□□□□□ -1.13
NPHP3-209ENST00000493732 TFF3Q07654 80 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 FAM27E3Q08E93 113 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 RTL8BQ17RB0 113 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 BSXQ3C1V8 233 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 RPL39P5Q59GN2 51 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 CT45A1Q5HYN5 189 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 CT45A3Q8NHU0 189 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 ANAPC16Q96DE5 110 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 FAM210BQ96KR6 192 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 RHOVQ96L33 236 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 NGBQ9NPG2 151 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 TCF19Q9Y242 345 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF257Q9Y2Q1 563 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 LINC00312Q9Y6C7 94 aa7.97□□□□□ -1.13
NPHP3-209ENST00000493732 ELOA3CA0A087WX78 387 aaPredicted RBP7.96□□□□□ -1.13
NPHP3-209ENST00000493732 F6UZH7 168 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 ERVFRD-1P60508 538 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 SSX9Q7RTT3 188 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 LURAP1LQ8IV03 231 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 RPRMLQ8N4K4 120 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF439Q8NDP4 499 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 OR4F5Q8NH21 305 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 GAFA1Q96PS6 74 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 OR5B12Q96R08 314 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 OR4F4Q96R69 305 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 TMEM204Q9BSN7 226 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 TMEM14BQ9NUH8 114 aa7.96□□□□□ -1.13
NPHP3-209ENST00000493732 SAA2-SAA4A0A096LPE2 208 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 MT-CO2P00403 227 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 SAA2P0DJI9 122 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-209ENST00000493732 HOXA5P20719 270 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 HNF4GQ14541 408 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 ADIRFQ15847 76 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 LYG1Q8N1E2 194 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms